(Q77702899)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9858731%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

review article

1 reference

title

Regulatory implications of protein assemblies at the gamma origin of plasmid R6K - a review (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9858731%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

author name string

M Filutowicz

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9858731%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

S A Rakowski

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9858731%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

language of work or name

English

0 references

publication date

1 November 1998

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9858731%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9858731%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

volume

223

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9858731%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

page(s)

195-204

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9858731%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

issue

1-2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9858731%20AND%20SRC:MED&resulttype=core&format=json

Extensive unwinding of the plasmid template during staged enzymatic initiation of DNA replication from the origin of the Escherichia coli chromosome.

7 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

The complete genome sequence of Escherichia coli K-12

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

A model for initiation at origins of DNA replication

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Formation of AraC-DNA sandwiches.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Dissociation kinetics of RepA dimers: implications for mechanisms of activation of DNA binding by chaperones.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Replication of R6K gamma origin in vitro: discrete start sites for DNA synthesis dependent on pi and its copy-up variants

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Altering DNA-binding specificity of GAL4 requires sequences adjacent to the zinc finger

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Activation of DNA binding by the monomeric form of the P1 replication initiator RepA by heat shock proteins DnaJ and DnaK.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Integration host factor of Escherichia coli reverses the inhibition of R6K plasmid replication by pi initiator protein

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Replication of plasmid R6K gamma origin in vivo and in vitro: dependence on IHF binding to the ihf1 site.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Specialized nucleoprotein structures at the origin of replication of bacteriophage lambda: localized unwinding of duplex DNA by a six-protein reaction

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Multiple DNA-protein interactions governing high-precision DNA transactions

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

The integration host factor of Escherichia coli binds to multiple sites at plasmid R6K gamma origin and is essential for replication

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Autorepressor properties of the pi-initiation protein encoded by plasmid R6K.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Role of the pi initiation protein and direct nucleotide sequence repeats in the regulation of plasmid R6K replication

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Binding of purified wild-type and mutant pi initiation proteins to a replication origin region of plasmid R6K.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Positive and negative roles of an initiator protein at an origin of replication

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Regulation of replication of an iteron-containing DNA molecule

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Cooperative binding of initiator protein to replication origin conferred by single amino acid substitution

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Interaction of the plasmid R6K-encoded replication initiator protein with its binding sites on DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

N-terminal truncated forms of the bifunctional pi initiation protein express negative activity on plasmid R6K replication.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Increased protein flexibility leads to promiscuous protein-DNA interactions in type IC restriction-modification systems

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Plasmid-encoded initiation protein is required for activity at all three origins of plasmid R6K DNA replication in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

A control element within a structural gene: The gal operon of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Replication initiator protein RepE of mini-F plasmid: functional differentiation between monomers (initiator) and dimers (autogenous repressor).

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Enzymatic replication of E. coli chromosomal origin is bidirectional

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Roles of Escherichia coli heat shock proteins DnaK, DnaJ and GrpE in mini-F plasmid replication.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Replication initiator protein of plasmid R6K autoregulates its own synthesis at the transcriptional step

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Structural and functional analysis of a replication enhancer: separation of the enhancer activity from origin function by mutational dissection of the replication origin gamma of plasmid R6K

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

An essential iteron-binding protein required for plasmid R1162 replication induces localized melting within the origin at a specific site in AT-rich DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Plasmid R6K DNA replication. II. Direct nucleotide sequence repeats are required for an active gamma-origin.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Trans-complementation-dependent replication of a low molecular weight origin fragment from plasmid R6K

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Transcriptional and translational initiation sites of IS50. Control of transposase and inhibitor expression

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Interaction of distinct domains in Mu transposase with Mu DNA ends and an internal transpositional enhancer.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Initiator protein pi can bind independently to two domains of the gamma origin core of plasmid R6K: the direct repeats and the A+T-rich segment

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

The dimerization domain of R6K plasmid replication initiator protein pi revealed by analysis of a truncated protein

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Replication of the R6K gamma origin in vitro: dependence on wt pi and hyperactive piS87N protein variant.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

An essential replication gene, repA, of plasmid pSC101 is autoregulated

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Deletions within a hinge region of a specific DNA-binding protein

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Monomers and dimers of the RepA protein in plasmid pSC101 replication: domains in RepA

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

DNA recognition by GAL4: structure of a protein-DNA complex.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Mutations in direct repeat sequences and in a conserved sequence adjacent to the repeats result in a defective replication origin in plasmid R6K.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Negative control of plasmid R6K replication: possible role of intermolecular coupling of replication origins

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Autonomous DNA binding domains of lambda integrase recognize two different sequence families

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Detection of DNA looping due to simultaneous interaction of a DNA-binding protein with two spatially separated binding sites on DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Enhancer-origin interaction in plasmid R6K involves a DNA loop mediated by initiator protein

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Spacing requirements between LexA operator half-sites can be relaxed by fusing the LexA DNA binding domain with some alternative dimerization domains

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

In vivo excision and amplification of large segments of the Escherichia coli genome

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

The replication initiator protein pi of the plasmid R6K specifically interacts with the host-encoded helicase DnaB.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

AraC protein can activate transcription from only one position and when pointed in only one direction

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

1 reference

7 January 2021

Flexibility of the yeast alpha 2 repressor enables it to occupy the ends of its operator, leaving the center free

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

1 reference

7 January 2021

Plasmid R6K DNA replication. III. Regulatory properties of the pi initiation protein.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Release of initiation control by a mutational alteration in the R6K pi protein required for plasmid DNA replication

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Nucleotide sequence of the region of an origin of replication of the antibiotic resistance plasmid R6K

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Plasmid R6K DNA replication. I. Complete nucleotide sequence of an autonomously replicating segment.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

DNA binding properties of purified replication initiator protein (Rep) encoded by plasmid pSC101.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Participation of Escherichia coli heat shock proteins DnaJ, DnaK, and GrpE in P1 plasmid replication

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Altered (copy-up) forms of initiator protein pi suppress the point mutations inactivating the gamma origin of plasmid R6K.

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Buffer composition mediates a switch between cooperative and independent binding of an initiator protein to DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Assemblies of replication initiator protein on symmetric and asymmetric DNA sequences depend on multiple protein oligomerization surfaces

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Interaction of Escherichia coli dnaB and dnaC(D) gene products in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

DnaJ, DnaK, and GrpE heat shock proteins are required in oriP1 DNA replication solely at the RepA monomerization step

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Roles of a 106-bp origin enhancer and Escherichia coli DnaA protein in replication of plasmid R6K

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Binding of DnaA protein to a replication enhancer counteracts the inhibition of plasmid R6K gamma origin replication mediated by elevated levels of R6K pi protein

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

A DNA segment conferring stable maintenance on R6K gamma-origin core replicons

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Preponderance of Fis-binding sites in the R6K gamma origin and the curious effect of the penicillin resistance marker on replication of this origin in the absence of Fis

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Two forms of replication initiator protein: positive and negative controls

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

Translational options for the pir gene of plasmid R6K: multiple forms of the replication initiator protein π

1 reference

https://api.crossref.org/works/10.1016%2FS0378-1119%2898%2900367-9

7 January 2021

10.1016/S0378-1119(98)00367-9

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9858731%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

1 reference