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The initiation of DNA base excision repair of dipyrimidine photoproducts
scientific article published on 01 January 1999
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed ID
9932454
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9932454%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
review article
1 reference
stated in
Europe PubMed Central
title
The initiation of DNA base excision repair of dipyrimidine photoproducts
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
9932454
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9932454%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
author name string
R S Lloyd
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed ID
9932454
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9932454%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
publication date
1 January 1999
1 reference
stated in
Europe PubMed Central
PubMed ID
9932454
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9932454%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
published in
Progress in Molecular Biology and Translational Science
1 reference
stated in
Europe PubMed Central
PubMed ID
9932454
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9932454%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
volume
62
1 reference
stated in
Europe PubMed Central
PubMed ID
9932454
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9932454%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
page(s)
155-175
1 reference
stated in
Europe PubMed Central
PubMed ID
9932454
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9932454%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
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Reactivation of Irradiated Bacteriophage by Transfer of Self-Reproducing Units
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Recovery of UV-inactivated E. coli cells by the v-gene action of phage T4
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Nucleases Specific for Ultraviolet Light-Irradiated DNA and their Possible Role in Dark Repair
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Endonucleolytic cleavage of UV-irradiated DNA controlled by the V+ gene in phage T4
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T4 endonuclease involved in repair of DNA.
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7 January 2021
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Mechanism of repair of DNA in bacteriophage. II. Inability of ultraviolet-sensitive strains of bacteriophage in inducing an enzyme activity to excise pyrimidine dimers
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Identification, physical map location and sequence of theden Vgene from bacteriophage T4
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Cleavage of pyrimidine dimers in specific DNA sequences by a pyrimidine dimer DNA-glycosylase of M. luteus
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Pyrimidine dimer-DNA glycosylases: studies on bacteriophage T4-infected and on uninfected Escherichia coli
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Differential destruction of the transforming activity of damaged deoxyribonucleic acid by a bacterial enzyme
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Repair of DNA studied with a nuclease specific for UV-induced lesions
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Purification and cloning of Micrococcus luteus ultraviolet endonuclease, an N-glycosylase/abasic lyase that proceeds via an imino enzyme-DNA intermediate.
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UV endonuclease of Micrococcus luteus, a cyclobutane pyrimidine dimer-DNA glycosylase/abasic lyase: cloning and characterization of the gene
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MutY, an adenine glycosylase active on G-A mispairs, has homology to endonuclease III.
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Identification of the structural and functional domains of MutY, an Escherichia coli DNA mismatch repair enzyme
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7 January 2021
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Structural basis for the excision repair of alkylation-damaged DNA
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7 January 2021
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Three-dimensional structure of a DNA repair enzyme, 3-methyladenine DNA glycosylase II, from Escherichia coli.
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7 January 2021
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Atomic structure of the DNA repair [4Fe-4S] enzyme endonuclease III
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Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure
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7 January 2021
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Analysis of 45 kb of DNA located at the left end of the chlorella virus PBCV-1 genome
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7 January 2021
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Characterization of a novel cis-syn and trans-syn-II pyrimidine dimer glycosylase/AP lyase from a eukaryotic algal virus, Paramecium bursaria chlorella virus-1.
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7 January 2021
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A eukaryotic DNA glycosylase/lyase recognizing ultraviolet light-induced pyrimidine dimers
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7 January 2021
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A new ATP-independent DNA endonuclease from Schizosaccharomyces pombe that recognizes cyclobutane pyrimidine dimers and 6-4 photoproducts
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An alternative eukaryotic DNA excision repair pathway
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7 January 2021
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What's old is new: an alternative DNA excision repair pathway
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Characterization of a UV endonuclease gene from the fission yeast Schizosaccharomyces pombe and its bacterial homolog
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Characterization of the alternative excision repair pathway of UV-damaged DNA in Schizosaccharomyces pombe.
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A eukaryotic gene encoding an endonuclease that specifically repairs DNA damaged by ultraviolet light
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Gene regulation by proteins acting nearby and at a distance
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Action at a distance along a DNA.
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The lac repressor-operator interaction. 3. Kinetic studies
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Involvement of outside DNA sequences in the major kinetic path by which EcoRI endonuclease locates and leaves its recognition sequence
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Does the specific recongnition of DNA by the restriction endonucleaseEcoRI involve a linear diffusion step? Investigation of the processivity of theEcoRI endonuclease
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Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory.
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Diffusion-driven mechanisms of protein translocation on nucleic acids. 2. The Escherichia coli lac repressor-operator interaction: equilibrium measurements
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7 January 2021
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Diffusion-driven mechanisms of protein translocation on nucleic acids. 3. The Escherichia coli lac repressor--operator interaction: kinetic measurements and conclusions.
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Salt dependence of the kinetics of the lac repressor-operator interaction: role of nonoperator deoxyribonucleic acid in the association reaction
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Ion effects on the lac repressor-operator equilibrium
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7 January 2021
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Thermodynamic stoichiometries of participation of water, cations and anions in specific and non-specific binding of lac repressor to DNA. Possible thermodynamic origins of the "glutamate effect" on protein-DNA interactions
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How Lac repressor finds lac operator in vitro
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Kinetic studies on Cro repressor-operator DNA interaction
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Energetics of subunit dimerization in bacteriophage .lambda. cI repressor: linkage to protons, temperature, and KCl
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Cooperative protein-DNA interactions: effects of potassium chloride on .lambda. cI binding to OR
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Comparison of operator-specific and nonspecific DNA binding of the .lambda. cI repressor: [KCl] and pH effects
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7 January 2021
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Ligand-modulated binding of a gene regulatory protein to DNA. Quantitative analysis of cyclic-AMP induced binding of CRP from Escherichia coli to non-specific and specific DNA targets
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7 January 2021
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On the promoter complex formation rate of E. coli RNA polymerases with T7 phage DNA.
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Facilitated diffusion of a DNA binding protein on chromatin.
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7 January 2021
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Regulation of the kinetics of the interaction of Escherichia coli RNA polymerase with the lambda PR promoter by salt concentration
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Salt-dependent binding of Escherichia coli RNA polymerase to DNA and specific transcription by the core enzyme and holoenzyme
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7 January 2021
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Replacement of potassium chloride by potassium glutamate dramatically enhances protein-DNA interactions in vitro
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7 January 2021
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A transcriptional enhancer whose function imposes a requirement that proteins track along DNA.
1 reference
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Processive action of T4 endonuclease V on ultraviolet-irradiated DNA
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7 January 2021
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Processivity of T4 endonuclease V is sensitive to NaCl concentration
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https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
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7 January 2021
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Processivity of uracil DNA glycosylase
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https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
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7 January 2021
based on heuristic
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Processivity of Escherichia coli and rat liver mitochondrial uracil-DNA glycosylase is affected by NaCl concentration
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7 January 2021
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ATP-dependent partitioning of the DNA template into supercoiled domains by Escherichia coli UvrAB
1 reference
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7 January 2021
based on heuristic
inferred from DOI database lookup
Superhelical stress restrained in plasmid DNA during repair synthesis initiated by the UvrA, B and C proteins in vitro
1 reference
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reference URL
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7 January 2021
based on heuristic
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Biological consequences of a reduction in the non-target DNA scanning capacity of a DNA repair enzyme.
1 reference
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reference URL
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7 January 2021
based on heuristic
inferred from DOI database lookup
Site-directed mutagenesis of the T4 endonuclease V gene: the role of arginine-3 in the target search.
1 reference
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7 January 2021
based on heuristic
inferred from DOI database lookup
Consequences of molecular engineering enhanced DNA binding in a DNA repair enzyme
1 reference
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7 January 2021
based on heuristic
inferred from DOI database lookup
Mutations in endonuclease V that affect both protein-protein association and target site location
1 reference
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7 January 2021
based on heuristic
inferred from DOI database lookup
Oligonucleotide site directed mutagenesis of all histidine residues within the T4 endonuclease V gene: role in enzyme-nontarget DNA binding
1 reference
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https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
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7 January 2021
based on heuristic
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Role of specific amino acid residues in T4 endonuclease V that alter nontarget DNA binding
1 reference
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7 January 2021
based on heuristic
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Evidence for an imino intermediate in the T4 endonuclease V reaction
1 reference
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https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
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inferred from DOI database lookup
X-ray structure of T4 endonuclease V: an excision repair enzyme specific for a pyrimidine dimer
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based on heuristic
inferred from DOI database lookup
Role of the basic amino acid cluster and Glu-23 in pyrimidine dimer glycosylase activity of T4 endonuclease V
1 reference
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Participation of glutamic acid 23 of T4 endonuclease V in the beta-elimination reaction of an abasic site in a synthetic duplex DNA
1 reference
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7 January 2021
based on heuristic
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Purification and characterization of TAFI, a thrombin-activable fibrinolysis inhibitor
1 reference
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7 January 2021
based on heuristic
inferred from DOI database lookup
Structural determinants for specific recognition by T4 endonuclease V
1 reference
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https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
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7 January 2021
based on heuristic
inferred from DOI database lookup
Investigation of the mechanisms of DNA binding of the human G/T glycosylase using designed inhibitors
1 reference
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https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
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7 January 2021
based on heuristic
inferred from DOI database lookup
Atomic model of a pyrimidine dimer excision repair enzyme complexed with a DNA substrate: structural basis for damaged DNA recognition
1 reference
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reference URL
https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
On base flipping
1 reference
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reference URL
https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Finding a basis for flipping bases.
1 reference
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reference URL
https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
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7 January 2021
based on heuristic
inferred from DOI database lookup
The role of base flipping in damage recognition and catalysis by T4 endonuclease V.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
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7 January 2021
based on heuristic
inferred from DOI database lookup
Studies on the catalytic mechanism of five DNA glycosylases. Probing for enzyme-DNA imino intermediates
1 reference
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7 January 2021
based on heuristic
inferred from DOI database lookup
NH2-terminal proline acts as a nucleophile in the glycosylase/AP-lyase reaction catalyzed by Escherichia coli formamidopyrimidine-DNA glycosylase (Fpg) protein
1 reference
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Crossref
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7 January 2021
based on heuristic
inferred from DOI database lookup
A mammalian DNA repair enzyme that excises oxidatively damaged guanines maps to a locus frequently lost in lung cancer
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https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
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7 January 2021
based on heuristic
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Physical mapping and complete nucleotide sequence of the denV gene of bacteriophage T4
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Chlorella virus PBCV-1 encodes a homolog of the bacteriophage T4 UV damage repair gene denV
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0079-6603%2808%2960507-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0079-6603(08)60507-3
1 reference
stated in
Europe PubMed Central
PubMed ID
9932454
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9932454%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
PubMed ID
9932454
1 reference
stated in
Europe PubMed Central
PubMed ID
9932454
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9932454%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 December 2019
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