(Q78679297)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488002%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

title

Charge-charge interactions are the primary determinants of the pK values of the ionizable groups in Ribonuclease T1 (English)

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15 December 2019

3

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15 December 2019

author name string

C Nick Pace

1

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15 December 2019

Beatrice M P Huyghues-Despointes

2

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15 December 2019

Gerald R Grimsley

4

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15 December 2019

J Martin Scholtz

5

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15 December 2019

publication date

1 December 2002

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15 December 2019

published in

Biophysical Chemistry

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15 December 2019

volume

101-102

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15 December 2019

page(s)

211-219

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Ionization properties of titratable groups in ribonuclease T1. I. pKa values in the native state determined by two-dimensional heteronuclear NMR spectroscopy

15 December 2019

cites work

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7 January 2021

Ionization properties of titratable groups in ribonuclease T1. II. Electrostatic analysis

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7 January 2021

Continuum electrostatic analysis of irregular ionization and proton allocation in proteins

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7 January 2021

Electrostatics and diffusion of molecules in solution: simulations with the University of Houston Brownian dynamics program

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The determinants of pKas in proteins

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pKa's of ionizable groups in proteins: atomic detail from a continuum electrostatic model

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7 January 2021

On the calculation of pKas in proteins

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7 January 2021

A self-consistent, microenvironment modulated screened coulomb potential approximation to calculate pH-dependent electrostatic effects in proteins

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7 January 2021

Improving macromolecular electrostatics calculations

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Electrostatic models for computing protonation and redox equilibria in proteins.

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High apparent dielectric constants in the interior of a protein reflect water penetration

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Insensitivity of perturbed carboxyl pK(a) values in the ovomucoid third domain to charge replacement at a neighboring residue

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7 January 2021

Dielectric properties of proteins from simulation: the effects of solvent, ligands, pH, and temperature

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What are the dielectric "constants" of proteins and how to validate electrostatic models?

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Distance dependence and salt sensitivity of pairwise, coulombic interactions in a protein

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7 January 2021

Ribonuclease T1 with free recognition and catalytic site: crystal structure analysis at 1.5 A resolution

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7 January 2021

Limits of NMR structure determination using variable target function calculations: ribonuclease T1, a case study

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7 January 2021

Simulation of activation free energies in molecular systems

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7 January 2021

On the pH dependence of protein stability.

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7 January 2021

Purification of ribonucleases Sa, Sa2, and Sa3 after expression in Escherichia coli

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7 January 2021

The dielectric constant of a folded protein

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7 January 2021

Destabilization of a protein helix by electrostatic interactions

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7 January 2021

The alpha-helix of ribonuclease T1 as an independent stability unit: direct comparison of peptide and protein stability

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7 January 2021

The alpha-helix dipole and the properties of proteins

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7 January 2021

alpha-Helix dipole model and electrostatic stabilization of 4-alpha-helical proteins

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7 January 2021

The energetics of ion-pair and hydrogen-bonding interactions in a helical peptide

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7 January 2021

Effect of a single aspartate on helix stability at different positions in a neutral alanine-based peptide

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7 January 2021

Contribution of histidine residues to the conformational stability of ribonuclease T1 and mutant Glu-58----Ala

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7 January 2021

Buried, charged, non-ion-paired aspartic acid 76 contributes favorably to the conformational stability of ribonuclease T1

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7 January 2021

Hydration water molecules of nucleotide-free RNase T1 studied by NMR spectroscopy in solution

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7 January 2021

Dissection of the structural and functional role of a conserved hydration site in RNase T1

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7 January 2021

The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin

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7 January 2021

Complete measurement of the pKa values of the carboxyl and imidazole groups in Bacillus circulans xylanase

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7 January 2021

pKA values of carboxyl groups in the native and denatured states of barnase: the pKA values of the denatured state are on average 0.4 units lower than those of model compounds

1 reference

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7 January 2021

pH-induced denaturation of proteins: a single salt bridge contributes 3-5 kcal/mol to the free energy of folding of T4 lysozyme

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7 January 2021

The interpretation of protein structures: Estimation of static accessibility

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7 January 2021

Contribution of a conserved asparagine to the conformational stability of ribonucleases Sa, Ba, and T1

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7 January 2021

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

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7 January 2021

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Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488002%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

1 reference