(Q79924060)

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Identification of sequence motifs at the breakpoint junctions in three t(1;9)(p36.3;q34) and delineation of mechanisms involved in generating balanced translocations

scientific article published on 18 July 2006

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16847692%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

Identification of sequence motifs at the breakpoint junctions in three t(1;9)(p36.3;q34) and delineation of mechanisms involved in generating balanced translocations (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16847692%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

Marzena Gajecka

1

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Europe PubMed Central

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27 December 2019

author name string

Adam Pavlicek

2

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Europe PubMed Central

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27 December 2019

Caron D Glotzbach

3

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Europe PubMed Central

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27 December 2019

Blake C Ballif

4

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Europe PubMed Central

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27 December 2019

Malgorzata Jarmuz

5

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Europe PubMed Central

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27 December 2019

Jerzy Jurka

6

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Europe PubMed Central

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27 December 2019

Lisa G Shaffer

7

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Europe PubMed Central

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27 December 2019

publication date

18 July 2006

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16847692%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16847692%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

120

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Europe PubMed Central

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27 December 2019

4

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Europe PubMed Central

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27 December 2019

519-526

1 reference

Europe PubMed Central

PubMed publication ID

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27 December 2019

Molecular genetic analysis of a de novo balanced translocation t(6;17)(p21.31;q11.2) associated with hypospadias and anorectal malformation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a 3.0-kb major recombination hotspot in patients with Sotos syndrome who carry a common 1.9-Mb microdeletion

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A computer aided thermodynamic approach for predicting the formation of Z-DNA in naturally occurring sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular analysis of a constitutional X-autosome translocation in a female with muscular dystrophy

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Monosomy 1p36 breakpoint junctions suggest pre-meiotic breakage-fusion-bridge cycles are involved in generating terminal deletions

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Monosomy 1p36 breakpoints indicate repetitive DNA sequence elements may be involved in generating and/or stabilizing some terminal deletions

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The human protein translin specifically binds single-stranded microsatellite repeats, d(GT)n, and G-strand telomeric repeats, d(TTAGGG)n: a study of the binding parameters

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A candidate gene for congenital bilateral isolated ptosis identified by molecular analysis of a de novo balanced translocation

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The translin ring specifically recognizes DNA ends at recombination hot spots in the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular model for the transposition and replication of bacteriophage Mu and other transposable elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translin binds to the sequences adjacent to the breakpoints of the TLS and CHOP genes in liposarcomas with translocation t(12;6)

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translin recognition site sequences flank chromosome translocation breakpoints in alveolar rhabdomyosarcoma cell lines

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomic rearrangements resulting in PLP1 deletion occur by nonhomologous end joining and cause different dysmyelinating phenotypes in males and females

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular analysis of X-autosome translocations in females with Duchenne muscular dystrophy

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Repbase update: a database and an electronic journal of repetitive elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tandem repeats finder: a program to analyze DNA sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Homology-directed repair is a major double-strand break repair pathway in mammalian cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA damage-dependent interaction of the nuclear matrix protein C1D with Translin-associated factor X (TRAX)

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A metric map of humans: 23,500 loci in 850 bands

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular characterization of a novel translocation t(5;14)(q21;q32) in a patient with congenital abnormalities

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Non-B DNA conformations, genomic rearrangements, and human disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reciprocal translocations in Saccharomyces cerevisiae formed by nonhomologous end joining

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of cryptic imbalance in phenotypically normal and abnormal translocation carriers.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translocation breakpoint mapping and sequence analysis in three monosomy 1p36 subjects with der(1)t(1;1)(p36;q44) suggest mechanisms for telomere capture in stabilizing de novo terminal rearrangements.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

EMBOSS: the European Molecular Biology Open Software Suite

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

FISHing for mechanisms of cytogenetically defined terminal deletions using chromosome-specific subtelomeric probes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A role for the octameric ring protein, Translin, in mitotic cell division

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Trax (translin-associated factor X), a primarily cytoplasmic protein, inhibits the binding of TB-RBP (translin) to RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The highest gene concentrations in the human genome are in telomeric bands of metaphase chromosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translocation and gross deletion breakpoints in human inherited disease and cancer I: Nucleotide composition and recombination-associated motifs

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of a novel gene disrupted by a balanced chromosomal translocation t(2;19)(q11.2;q13.3) in a family with cleft lip and palate

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Breakpoints of gross deletions coincide with non-B DNA conformations

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel gene, Translin, encodes a recombination hotspot binding protein associated with chromosomal translocations

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physical map of 1p36, placement of breakpoints in monosomy 1p36, and clinical characterization of the syndrome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Representing GC variation along eukaryotic chromosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crossover breakpoint mapping identifies a subtelomeric hotspot for male meiotic recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translin-associated factor X is post-transcriptionally regulated by its partner protein TB-RBP, and both are essential for normal cell proliferation

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Implications of human genome architecture for rearrangement-based disorders: the genomic basis of disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Meiotic messenger RNA and noncoding RNA targets of the RNA-binding protein Translin (TSN) in mouse testis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA breakage and repair

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular breakpoint cloning and gene expression studies of a novel translocation t(4;15)(q27;q11.2) associated with Prader-Willi syndrome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characteristics of genomic breakpoints in TLS-CHOP translocations in liposarcomas suggest the involvement of Translin and topoisomerase II in the process of translocation

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cell cycle and genetic requirements of two pathways of nonhomologous end-joining repair of double-strand breaks in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translocation and gross deletion breakpoints in human inherited disease and cancer II: Potential involvement of repetitive sequence elements in secondary structure formation between DNA ends

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Disruption of two novel genes by a translocation co-segregating with schizophrenia

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA helix: the importance of being GC-rich

1 reference

https://pubmed.ncbi.nlm.nih.gov/16847692

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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