(Q80265745)

English

Global gene expression profiling of formalin-fixed paraffin-embedded tumor samples: a comparison to snap-frozen material using oligonucleotide microarrays

scientific article published on 04 May 2007

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scholarly article

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30 December 2019

Global gene expression profiling of formalin-fixed paraffin-embedded tumor samples: a comparison to snap-frozen material using oligonucleotide microarrays (English)

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30 December 2019

author name string

Matthias Frank

1

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30 December 2019

Claudia Döring

2

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30 December 2019

Dirk Metzler

3

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30 December 2019

Susan Eckerle

4

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30 December 2019

Martin-Leo Hansmann

5

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30 December 2019

publication date

4 May 2007

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30 December 2019

Virchows Archiv

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30 December 2019

450

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30 December 2019

699-711

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30 December 2019

6

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30 December 2019

https://scigraph.springernature.com/pub.10.1007/s00428-007-0412-9

0 references

Preliminary comparison of quantity, quality, and microarray performance of RNA extracted from formalin-fixed, paraffin-embedded, and unfixed frozen tissue samples

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular profiling of diffuse large B-cell lymphoma identifies robust subtypes including one characterized by host inflammatory response

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-accuracy amplification of nanogram total RNA amounts for gene profiling

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of Hodgkin and Reed-Sternberg cell-specific genes by gene expression profiling

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microarray platforms--comparisons and contrasts.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Patient-based cross-platform comparison of oligonucleotide microarray expression profiles.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An expression-based site of origin diagnostic method designed for clinical application to cancer of unknown origin

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reliable gene expression measurements from degraded RNA by quantitative real-time PCR depend on short amplicons and a proper normalization

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Technology insight: Application of molecular techniques to formalin-fixed paraffin-embedded tissues from breast cancer

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

More powerful procedures for multiple significance testing

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Profiling of Hodgkin's lymphoma cell line L1236 and germinal center B cells: identification of Hodgkin's lymphoma-specific genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative mRNA expression analysis from formalin-fixed, paraffin-embedded tissues using 5' nuclease quantitative reverse transcription-polymerase chain reaction

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A two-gene expression ratio predicts clinical outcome in breast cancer patients treated with tamoxifen

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

TSH receptor status of thyroid neoplasms--TaqMan RT-PCR analysis of archival material

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

State of the science: molecular classifications of breast cancer for clinical diagnostics

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The RIN: an RNA integrity number for assigning integrity values to RNA measurements

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular classification of human cancers using a 92-gene real-time quantitative polymerase chain reaction assay.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative gene expression analysis in microdissected archival formalin-fixed and paraffin-embedded tumor tissue

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The diagnostic potential of the chromosome translocation t(2;13) in rhabdomyosarcoma: a Pcr study of fresh-frozen and paraffin-embedded tumour samples

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluation of gene expression measurements from commercial microarray platforms

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Variance stabilization applied to microarray data calibration and to the quantification of differential expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Towards quantitative mRNA analysis in paraffin-embedded tissues using real-time reverse transcriptase-polymerase chain reaction: a methodological study on lymph nodes from melanoma patients

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Measurement of gene expression in archival paraffin-embedded tissues: development and performance of a 92-gene reverse transcriptase-polymerase chain reaction assay

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accuracy and calibration of commercial oligonucleotide and custom cDNA microarrays

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

1 reference

https://pubmed.ncbi.nlm.nih.gov/17479285

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00428-007-0412-9

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17479285%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17479285%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

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