(Q82263581)

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Genome analysis of Escherichia coli promoter sequences evidences that DNA static curvature plays a more important role in gene transcription than has previously been anticipated

scientific article published on 18 January 2006

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15 January 2020

Genome analysis of Escherichia coli promoter sequences evidences that DNA static curvature plays a more important role in gene transcription than has previously been anticipated (English)

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15 January 2020

Escherichia coli

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15 January 2020

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15 January 2020

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Olivares-Zavaleta N

1

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18 January 2006

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15 January 2020

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15 January 2020

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15 January 2020

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15 January 2020

329-337

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15 January 2020

Localization of the intrinsically bent DNA region upstream of the E.coli rrnB P1 promoter

1 reference

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Sigma s-dependent promoters in Escherichia coli are located in DNA regions with intrinsic curvature

1 reference

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Activation of transcription at sigma 54-dependent promoters on linear templates requires intrinsic or induced bending of the DNA

1 reference

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H-NS: a modulator of environmentally regulated gene expression.

1 reference

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Static bend of DNA helix at the activator recognition site of the ompF promoter in Escherichia coli

1 reference

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7 January 2021

The virF promoter in Shigella: more than just a curved DNA stretch

1 reference

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Thermoregulation of the Escherichia coli O157:H7 pO157 ecf operon and lipid A myristoyl transferase activity involves intrinsically curved DNA.

1 reference

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7 January 2021

Relationship between codon usage and sequence-dependent curvature of genomes

1 reference

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Conservation of DNA curvature signals in regulatory regions of prokaryotic genes

1 reference

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RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12

1 reference

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Expression of the gene encoding the major bacterial nucleoid protein H-NS is subject to transcriptional auto-repression

1 reference

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Bending and curvature calculations in B-DNA.

1 reference

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Sequence periodicities in chicken nucleosome core DNA.

1 reference

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7 January 2021

Clues and consequences of DNA bending in transcription

1 reference

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7 January 2021

Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity

1 reference

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7 January 2021

Linearization and integration of DNA into cells preferentially occurs at intrinsically curved regions from human LINE-1 repetitive element

1 reference

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7 January 2021

Genome organisation and chromatin structure in Escherichia coli

1 reference

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7 January 2021

Identification of the promoter, operator, and 5' and 3' ends of the mRNA of the Escherichia coli K-12 gene aroG.

1 reference

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7 January 2021

Regulation of Escherichia coli pyrC by the purine regulon repressor protein

1 reference

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7 January 2021

Sequence distributions associated with DNA curvature are found upstream of strong E. coli promoters

1 reference

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7 January 2021

Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli

1 reference

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Interaction of the C-terminal domain of the E. coli RNA polymerase alpha subunit with the UP element: recognizing the backbone structure in the minor groove surface

1 reference

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7 January 2021

Mutational analysis of the Escherichia coli glpFK region with Tn5 mutagenesis and the polymerase chain reaction

1 reference

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7 January 2021

Upstream curved sequences influence the initiation of transcription at the Escherichia coli galactose operon

1 reference

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DNA target sequence and FNR-dependent gene expression

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Phasing of protein-induced DNA bends in a recombination complex.

1 reference

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7 January 2021

DNA bending and twisting properties of integration host factor determined by DNA cyclization

1 reference

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7 January 2021

Conformational changes of the upstream DNA mediated by H-NS and FIS regulate E. coli RrnB P1 promoter activity.

1 reference

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7 January 2021

Identifying global regulators in transcriptional regulatory networks in bacteria

1 reference

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The role of a static bend in the DNA of the aroF regulatory region of Escherichia coli

1 reference

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The curved DNA structure in the 5'-upstream region of the light-responsive genes: its universality, binding factor and function for cyanobacterial psbA transcription

1 reference

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A novel type of DNA curvature present in a Clostridium perfringens ferredoxin gene: characterization and role in gene expression.

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A powerful non-homology method for the prediction of operons in prokaryotes

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DNA sequencing with chain-terminating inhibitors

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Thermoregulation of Shigella and Escherichia coli EIEC pathogenicity. A temperature-dependent structural transition of DNA modulates accessibility of virF promoter to transcriptional repressor H-NS.

1 reference

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The bundle-forming pili of enteropathogenic Escherichia coli: transcriptional regulation by environmental signals

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Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid

1 reference

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7 January 2021

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10.1016/J.YGENO.2005.11.023

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16413165%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16413165%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

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