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The preparation and applications of cytoplasmic extracts from mammalian cells for studying aspects of mRNA decay
scientific article published on 01 January 2008
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scholarly article
1 reference
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Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
title
The preparation and applications of cytoplasmic extracts from mammalian cells for studying aspects of mRNA decay
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
author name string
Kevin J Sokoloski
series ordinal
1
1 reference
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Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
Jeffrey Wilusz
series ordinal
2
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Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
Carol J Wilusz
series ordinal
3
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Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
publication date
1 January 2008
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Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
published in
Methods in Enzymology
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
volume
448
1 reference
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Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
page(s)
139-163
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
cites work
Analysis of the products of mRNA decapping and 3'-to-5' decay by denaturing gel electrophoresis
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
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7 January 2021
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inferred from DOI database lookup
Translation of poliovirus rna in vitro: Changes in cleavage pattern and initiation sites by ribosomal salt wash
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
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7 January 2021
based on heuristic
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Stability regulation of mRNA and the control of gene expression
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
AU binding proteins recruit the exosome to degrade ARE-containing mRNAs
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The decapping activator Lsm1p-7p-Pat1p complex has the intrinsic ability to distinguish between oligoadenylated and polyadenylated RNAs
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dcp2 Decaps m2,2,7GpppN-capped RNAs, and its activity is sequence and context dependent
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
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7 January 2021
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A turnover pathway for both stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation
1 reference
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reference URL
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7 January 2021
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ELAV proteins stabilize deadenylated intermediates in a novel in vitro mRNA deadenylation/degradation system
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
An in vitro system using HeLa cytoplasmic extracts that reproduces regulated mRNA stability
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
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inferred from DOI database lookup
Immediate early response of the circadian polyA ribonuclease nocturnin to two extracellular stimuli.
1 reference
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reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The highways and byways of mRNA decay
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A KH domain RNA binding protein, KSRP, promotes ARE-directed mRNA turnover by recruiting the degradation machinery
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification of a novel vertebrate circadian clock-regulated gene encoding the protein nocturnin
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
Insights into the structure, mechanism, and regulation of scavenger mRNA decapping activity
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Splicing of in vitro synthesized messenger RNA precursors in HeLa cell extracts
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
RNA-quality control by the exosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Structure and function of poly(A) binding proteins
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The scavenger mRNA decapping enzyme DcpS is a member of the HIT family of pyrophosphatases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
DNA-dependent transcription of adenovirus genes in a soluble whole-cell extract.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Accurate cleavage and polyadenylation of exogenous RNA substrate
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A+U-rich instability elements differentially activate 5'-3' and 3'-5' mRNA decay.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A cell-free mRNA stability assay reveals conservation of the enzymes and mechanisms of mRNA decay between mosquito and mammalian cell lines
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Decay of mRNAs targeted by RISC requires XRN1, the Ski complex, and the exosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
P bodies and the control of mRNA translation and degradation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Functional characterization of the mammalian mRNA decapping enzyme hDcp2
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The hDcp2 protein is a mammalian mRNA decapping enzyme
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification and characterization of proteins binding A + U-rich elements
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A 64 kd nuclear protein binds to RNA segments that include the AAUAAA polyadenylation motif
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Purification, characterization, and cDNA cloning of an AU-rich element RNA-binding protein, AUF1
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902608-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0076-6879(08)02608-6
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
PubMed publication ID
19111175
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111175
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111175%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
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