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Determining in vivo activity of the yeast cytoplasmic exosome
scientific article published on 01 January 2008
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
title
Determining in vivo activity of the yeast cytoplasmic exosome
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
author name string
Daneen Schaeffer
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
Stacie Meaux
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
Amanda Clark
series ordinal
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
Ambro van Hoof
series ordinal
4
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
publication date
1 January 2008
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
published in
Methods in Enzymology
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
volume
448
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
page(s)
227-239
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
cites work
Functions of the exosome in rRNA, snoRNA and snRNA synthesis
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Degradation of ribosomal RNA precursors by the exosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Ski7p G protein interacts with the exosome and the Ski complex for 3'-to-5' mRNA decay in yeast
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Antiviral protein Ski8 is a direct partner of Spo11 in meiotic DNA break formation, independent of its cytoplasmic role in RNA metabolism
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Rrp6p, the yeast homologue of the human PM-Scl 100-kDa autoantigen, is essential for efficient 5.8 S rRNA 3' end formation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The yeast antiviral proteins Ski2p, Ski3p, and Ski8p exist as a complex in vivo
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A small segment of the MAT alpha 1 transcript promotes mRNA decay in Saccharomyces cerevisiae: a stimulatory role for rare codons
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3' end formation of 5.8S rRNA in Saccharomyces cerevisiae
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Endonucleolytic cleavage of eukaryotic mRNAs with stalls in translation elongation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A synthetic A tail rescues yeast nuclear accumulation of a ribozyme-terminated transcript
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A single subunit, Dis3, is essentially responsible for yeast exosome core activity
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
RNA-quality control by the exosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Isolation and characterization of Saccharomyces cerevisiae mRNA transport-defective (mtr) mutants
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
RNA degradation by the exosome is promoted by a nuclear polyadenylation complex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Reconstitution, activities, and structure of the eukaryotic RNA exosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Yeast transcripts cleaved by an internal ribozyme provide new insight into the role of the cap and poly(A) tail in translation and mRNA decay
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The 3' end of yeast 5.8S rRNA is generated by an exonuclease processing mechanism
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Exploration of essential gene functions via titratable promoter alleles
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Turnover mechanisms of the stable yeast PGK1 mRNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Temperature-sensitive mutants of the exosome subunit Rrp43p show a deficiency in mRNA degradation and no longer interact with the exosome.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Contribution of domain structure to the RNA 3' end processing and degradation functions of the nuclear exosome subunit Rrp6p
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The inheritance of the killer character in yeast
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
"Superkiller" mutations suppress chromosomal mutations affecting double-stranded RNA killer plasmid replication in saccharomyces cerevisiae
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Exosome-mediated recognition and degradation of mRNAs lacking a termination codon
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Function of the ski4p (Csl4p) and Ski7p proteins in 3'-to-5' degradation of mRNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A new yeast poly(A) polymerase complex involved in RNA quality control
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A genomic screen in yeast reveals novel aspects of nonstop mRNA metabolism
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902612-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0076-6879(08)02612-8
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
PubMed publication ID
19111179
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19111179
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19111179%20AND%20SRC:MED&resulttype=core&format=json
retrieved
19 January 2020
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