(Q84347894)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22685167%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

title

Preferential retention of circadian clock genes during diploidization following whole genome triplication in Brassica rapa (English)

1 reference

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4 February 2020

1 reference

whole genome sequencing

1 reference

6

1 reference

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4 February 2020

author name string

Ping Lou

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22685167%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

Jian Wu

2

1 reference

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4 February 2020

Feng Cheng

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22685167%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

Laura G Cressman

4

1 reference

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4 February 2020

Xiaowu Wang

5

1 reference

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4 February 2020

publication date

8 June 2012

1 reference

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4 February 2020

1 reference

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4 February 2020

volume

24

1 reference

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4 February 2020

issue

6

1 reference

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4 February 2020

page(s)

2415-2426

1 reference

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Modeling gene and genome duplications in eukaryotes

4 February 2020

cites work

1 reference

12 December 2020

Genomewide nonadditive gene regulation in Arabidopsis allotetraploids

1 reference

12 December 2020

Comparative mapping, genomic structure, and expression analysis of eight pseudo-response regulator genes in Brassica rapa

1 reference

12 December 2020

The gene balance hypothesis: from classical genetics to modern genomics

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12 December 2020

FKF1, a clock-controlled gene that regulates the transition to flowering in Arabidopsis

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12 December 2020

Polyploidy and angiosperm diversification

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12 December 2020

Mapping loci controlling flowering time in Brassica oleracea

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12 December 2020

The genome of the mesopolyploid crop species Brassica rapa

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12 December 2020

The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme

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12 December 2020

Circadian clock mutants in Arabidopsis identified by luciferase imaging

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12 December 2020

Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation.

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12 December 2020

Arabidopsis circadian clock protein, TOC1, is a DNA-binding transcription factor

1 reference

12 December 2020

LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock

1 reference

12 December 2020

F-box proteins FKF1 and LKP2 act in concert with ZEITLUPE to control Arabidopsis clock progression

1 reference

12 December 2020

Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes

1 reference

12 December 2020

ZEITLUPE encodes a novel clock-associated PAS protein from Arabidopsis

1 reference

12 December 2020

Does the core circadian clock in the moss Physcomitrella patens (Bryophyta) comprise a single loop?

1 reference

12 December 2020

Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss

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12 December 2020

The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation.

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12 December 2020

Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids

1 reference

12 December 2020

Widespread genome duplications throughout the history of flowering plants

1 reference

12 December 2020

Overlapping and Distinct Roles of PRR7 and PRR9 in the Arabidopsis Circadian Clock

1 reference

12 December 2020

PSEUDO-RESPONSE REGULATOR 7 and 9 are partially redundant genes essential for the temperature responsiveness of the Arabidopsis circadian clock

1 reference

12 December 2020

Comparative evolution of photosynthetic genes in response to polyploid and nonpolyploid duplication

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12 December 2020

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

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12 December 2020

PRR3 Is a vascular regulator of TOC1 stability in the Arabidopsis circadian clock

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12 December 2020

Network news: prime time for systems biology of the plant circadian clock.

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12 December 2020

Ancestral polyploidy in seed plants and angiosperms

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12 December 2020

How to usefully compare homologous plant genes and chromosomes as DNA sequences

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12 December 2020

Robust circadian rhythms of gene expression in Brassica rapa tissue culture.

1 reference

12 December 2020

Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and Sequenom iPLEX MassARRAY genotyping.

1 reference

12 December 2020

Evolution of the class III HD-Zip gene family in land plants

1 reference

12 December 2020

Two-phase resolution of polyploidy in the Arabidopsis metabolic network gives rise to relative and absolute dosage constraints

1 reference

12 December 2020

The genetics of plant clocks

1 reference

12 December 2020

REVEILLE8 and PSEUDO-REPONSE REGULATOR5 form a negative feedback loop within the Arabidopsis circadian clock

1 reference

12 December 2020

A functional genomics approach reveals CHE as a component of the Arabidopsis circadian clock

1 reference

12 December 2020

Quantitative analysis of regulatory flexibility under changing environmental conditions

1 reference

12 December 2020

The ELF4-ELF3-LUX complex links the circadian clock to diurnal control of hypocotyl growth

1 reference

12 December 2020

PSEUDO-RESPONSE REGULATORS, PRR9, PRR7 and PRR5, together play essential roles close to the circadian clock of Arabidopsis thaliana.

1 reference

12 December 2020

Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana

1 reference

12 December 2020

Clocks in the green lineage: comparative functional analysis of the circadian architecture of the picoeukaryote ostreococcus

1 reference

12 December 2020

REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways

1 reference

12 December 2020

Heterologous expression and functional characterization of a Physcomitrella Pseudo response regulator homolog, PpPRR2, in Arabidopsis

1 reference

12 December 2020

Phylogenetic analysis of the plant-specific zinc finger-homeobox and mini zinc finger gene families.

1 reference

12 December 2020

Insights from the comparison of plant genome sequences

1 reference

12 December 2020

Bias in plant gene content following different sorts of duplication: tandem, whole-genome, segmental, or by transposition

1 reference

12 December 2020

Weather and seasons together demand complex biological clocks

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12 December 2020

An expanding universe of circadian networks in higher plants

1 reference

12 December 2020

Phytochrome-mediated development in land plants: red light sensing evolves to meet the challenges of changing light environments

1 reference

12 December 2020

Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes

1 reference

12 December 2020

Biased gene fractionation and dominant gene expression among the subgenomes of Brassica rapa

1 reference

12 December 2020

Highly specific gene silencing by artificial microRNAs in Arabidopsis.

1 reference

12 December 2020

Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids

1 reference

12 December 2020

The F-box protein ZEITLUPE confers dosage-dependent control on the circadian clock, photomorphogenesis, and flowering time.

1 reference

12 December 2020

CIRCADIAN CLOCK ASSOCIATED1 and LATE ELONGATED HYPOCOTYL function synergistically in the circadian clock of Arabidopsis.

1 reference

12 December 2020

Basic local alignment search tool

1 reference

12 December 2020

Prediction of complete gene structures in human genomic DNA

1 reference

12 December 2020

The circadian system in higher plants

1 reference

12 December 2020

Proteasome function is required for biological timing throughout the twenty-four hour cycle

1 reference

12 December 2020

Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dose-sensitive genes

1 reference

12 December 2020

The Bioperl toolkit: Perl modules for the life sciences

1 reference

12 December 2020

Thinking outside the F-box: novel ligands for novel receptors

1 reference

12 December 2020

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

1 reference

12 December 2020

PSEUDO-RESPONSE REGULATORS 9, 7, and 5 are transcriptional repressors in the Arabidopsis circadian clock.

1 reference

12 December 2020

Detection and resolution of genetic loci affecting circadian period in Brassica oleracea

1 reference

12 December 2020

Constitutive expression of CIR1 (RVE2) affects several circadian-regulated processes and seed germination in Arabidopsis.

1 reference

12 December 2020

Multiple light inputs to a simple clock circuit allow complex biological rhythms

1 reference

12 December 2020

The clock gene circuit in Arabidopsis includes a repressilator with additional feedback loops

1 reference

12 December 2020

Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveal gene loss, fragmentation, and dispersal after polyploidy

1 reference

12 December 2020

Complex regulation of the TIR1/AFB family of auxin receptors

1 reference

12 December 2020

The collapse of gene complement following whole genome duplication

1 reference

12 December 2020

The novel MYB protein EARLY-PHYTOCHROME-RESPONSIVE1 is a component of a slave circadian oscillator in Arabidopsis

1 reference

12 December 2020

Rates of nucleotide substitution in angiosperm mitochondrial DNA sequences and dates of divergence between Brassica and other angiosperm lineages

1 reference

12 December 2020

Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana

1 reference

12 December 2020

Genetic architecture of the circadian clock and flowering time in Brassica rapa

1 reference

12 December 2020

Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homologs.

1 reference

12 December 2020

Functional implication of the MYB transcription factor RVE8/LCL5 in the circadian control of histone acetylation

1 reference

12 December 2020

EARLY FLOWERING4 recruitment of EARLY FLOWERING3 in the nucleus sustains the Arabidopsis circadian clock

1 reference

12 December 2020

Isolation of circadian-associated genes in Brassica rapa by comparative genomics with Arabidopsis thaliana.

1 reference

12 December 2020

A rich TILLING resource for studying gene function in Brassica rapa

1 reference

12 December 2020

Gene-balanced duplications, like tetraploidy, provide predictable drive to increase morphological complexity

1 reference

12 December 2020

Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1

1 reference

12 December 2020

Altered patterns of fractionation and exon deletions in Brassica rapa support a two-step model of paleohexaploidy

1 reference

12 December 2020

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

1 reference

12 December 2020

Clustal W and Clustal X version 2.0

1 reference

12 December 2020

Phylogenetic footprint of the plant clock system in angiosperms: evolutionary processes of pseudo-response regulators

1 reference

12 December 2020

Phylogenetic analysis of Brassiceae based on the nucleotide sequences of the S-locus related gene, SLR1

1 reference

12 December 2020