(Q84574771)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19767748%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

title

Distinct promoter dynamics of the basal transcription factor TBP across the yeast genome (English)

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8 February 2020

1

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8 February 2020

author name string

Hetty A A M van Teeffelen

series ordinal

2

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8 February 2020

Frank C P Holstege

series ordinal

3

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8 February 2020

H Th Marc Timmers

series ordinal

4

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8 February 2020

publication date

20 September 2009

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Nature Structural & Molecular Biology

8 February 2020

published in

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8 February 2020

volume

16

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8 February 2020

page(s)

1043-1048

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8 February 2020

issue

10

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https://scigraph.springernature.com/pub.10.1038/nsmb.1674

8 February 2020

exact match

0 references

cites work

TAFs revisited: more data reveal new twists and confirm old ideas

1 reference

The general transcription machinery and general cofactors

31 March 2020

1 reference

TBP, a universal eukaryotic transcription factor?

31 March 2020

1 reference

Identification and distinct regulation of yeast TATA box-containing genes.

31 March 2020

1 reference

Global role of TATA box-binding protein recruitment to promoters in mediating gene expression profiles

31 March 2020

1 reference

Control of gene expression through regulation of the TATA-binding protein

31 March 2020

1 reference

The role of TBP in rDNA transcription by RNA polymerase I in Saccharomyces cerevisiae: TBP is required for upstream activation factor-dependent recruitment of core factor

31 March 2020

1 reference

Quantitation of the RNA polymerase II transcription machinery in yeast

31 March 2020

1 reference

Regulation of TATA-binding protein dynamics in living yeast cells

31 March 2020

1 reference

Yeast TATA-binding protein TFIID binds to TATA elements with both consensus and nonconsensus DNA sequences.

31 March 2020

1 reference

Cooperative action of NC2 and Mot1p to regulate TATA-binding protein function across the genome

31 March 2020

1 reference

Proteolytic turnover of the Gal4 transcription factor is not required for function in vivo

31 March 2020

1 reference

Histones are incorporated in trans during reassembly of the yeast PHO5 promoter

31 March 2020

1 reference

Dynamics of Replication-Independent Histone Turnover in Budding Yeast

31 March 2020

1 reference

Kinetic trapping of DNA by transcription factor IIIB

31 March 2020

1 reference

New model for the yeast RNA polymerase I transcription cycle

31 March 2020

1 reference

A step subsequent to preinitiation complex assembly at the ribosomal RNA gene promoter is rate limiting for human RNA polymerase I-dependent transcription

31 March 2020

1 reference

Distinct transcriptional responses of RNA polymerases I, II and III to aptamers that bind TBP

31 March 2020

1 reference

Transcriptional regulatory code of a eukaryotic genome

31 March 2020

1 reference

Dissecting the regulatory circuitry of a eukaryotic genome

31 March 2020

1 reference

A high-resolution atlas of nucleosome occupancy in yeast

31 March 2020

1 reference

Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association

31 March 2020

1 reference

Bidirectional promoters generate pervasive transcription in yeast

31 March 2020

1 reference

Mot1, a global repressor of RNA polymerase II transcription, inhibits TBP binding to DNA by an ATP-dependent mechanism.

31 March 2020

1 reference

Mot1p is essential for TBP recruitment to selected promoters during in vivo gene activation

31 March 2020

1 reference

Mot1 activates and represses transcription by direct, ATPase-dependent mechanisms

31 March 2020

1 reference

Efficient Binding of NC2⋅TATA-binding Protein to DNA in the Absence of TATA

31 March 2020

1 reference

NC2 mobilizes TBP on core promoter TATA boxes.

31 March 2020

1 reference

Yeast Skn7p activity is modulated by the Sln1p-Ypd1p osmosensor and contributes to regulation of the HOG pathway

31 March 2020

1 reference

The Skn7 response regulator controls gene expression in the oxidative stress response of the budding yeast Saccharomyces cerevisiae

31 March 2020

1 reference

Heat shock factor and the heat shock response

31 March 2020

1 reference

Yeast TFIID serves as a coactivator for Rap1p by direct protein-protein interaction

31 March 2020

1 reference

Activator-specific recruitment of TFIID and regulation of ribosomal protein genes in yeast

31 March 2020

1 reference

The symmetry of the yeast U6 RNA gene's TATA box and the orientation of the TATA-binding protein in yeast TFIIIB.

31 March 2020

1 reference

TATA-binding protein variants that bypass the requirement for Mot1 in vivo

31 March 2020

1 reference

Mot1 regulates the DNA binding activity of free TATA-binding protein in an ATP-dependent manner

31 March 2020

1 reference

Transcription termination and RNA degradation contribute to silencing of RNA polymerase II transcription within heterochromatin

31 March 2020

1 reference

The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo

31 March 2020

1 reference

Characterization of new Spt3 and TATA-binding protein mutants of Saccharomyces cerevisiae: Spt3 TBP allele-specific interactions and bypass of Spt8.

31 March 2020

1 reference

Site-specific cross-linking of TBP in vivo and in vitro reveals a direct functional interaction with the SAGA subunit Spt3.

31 March 2020

1 reference

A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiae.

31 March 2020

1 reference

A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome

31 March 2020

1 reference

Concurrent fast and slow cycling of a transcriptional activator at an endogenous promoter.

31 March 2020

1 reference

Dynamics of heat shock factor association with native gene loci in living cells.

31 March 2020

1 reference

SWI/SNF binding to the HO promoter requires histone acetylation and stimulates TATA-binding protein recruitment

31 March 2020

1 reference

Chromatin remodelling at promoters suppresses antisense transcription

31 March 2020

1 reference

Cellular stress alters the transcriptional properties of promoter-bound Mot1-TBP complexes.

31 March 2020

1 reference

TBP, Mot1, and NC2 establish a regulatory circuit that controls DPE-dependent versus TATA-dependent transcription

31 March 2020

1 reference

A TATA binding protein regulatory network that governs transcription complex assembly.

31 March 2020

1 reference

The use of biotin tagging in Saccharomyces cerevisiae improves the sensitivity of chromatin immunoprecipitation

31 March 2020

1 reference

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

31 March 2020

1 reference

Differential requirement of SAGA subunits for Mot1p and Taf1p recruitment in gene activation

31 March 2020

1 reference

Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification.

31 March 2020

1 reference

ChIPCodis: mining complex regulatory systems in yeast by concurrent enrichment analysis of chip-on-chip data

31 March 2020

1 reference

Kinetic analysis of yeast TFIID-TATA box complex formation suggests a multi-step pathway

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19767748

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19767748

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NSMB.1674

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19767748%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

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