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EPR methods to study specific metal-ion binding sites in RNA
scientific article published on 17 November 2009
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
title
EPR methods to study specific metal-ion binding sites in RNA
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
author name string
Laura Hunsicker-Wang
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
Matthew Vogt
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
Victoria J Derose
series ordinal
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
publication date
17 November 2009
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
number of pages
33
1 reference
based on heuristic
inferred from page(s)
published in
Methods in Enzymology
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
volume
468
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
page(s)
335-367
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
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Determining the Mg2+ stoichiometry for folding an RNA metal ion core
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EPR Spectroscopic Analysis of U7 Hammerhead Ribozyme Dynamics during Metal Ion Induced Folding†
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A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
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From nucleotides to ribozymes—A comparison of their metal ion binding properties
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Water counting: quantitating the hydration level of paramagnetic metal ions bound to nucleotides and nucleic acids.
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Structural analysis of metal ion ligation to nucleotides and nucleic acids using pulsed EPR spectroscopy
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Electron paramagnetic resonance spectroscopic measurement of Mn2+ binding affinities to the hammerhead ribozyme and correlation with cleavage activity
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Structural basis of the enhanced stability of a mutant ribozyme domain and a detailed view of RNA--solvent interactions
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Binding of manganese(II) to a tertiary stabilized hammerhead ribozyme as studied by electron paramagnetic resonance spectroscopy
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Determination of the number and location of the manganese binding sites of DNA quadruplexes in solution by EPR and NMR in the presence and absence of thrombin
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A thermodynamic framework for the magnesium-dependent folding of RNA.
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Catalytic and structural role of the metal ion in dUTP pyrophosphatase
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Pulsed EPR spectroscopy: biological applications
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7 January 2021
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Structural analysis of Cu(II) ligation to the 5'-GMP nucleotide by pulse EPR spectroscopy
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Structural investigation of a high-affinity MnII binding site in the hammerhead ribozyme by EPR spectroscopy and DFT calculations. Effects of neomycin B on metal-ion binding
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The crystal structure of yeast phenylalanine tRNA at 1.93 A resolution: a classic structure revisited
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EPR study of substrate binding to the Mn(II) active site of the bacterial antibiotic resistance enzyme FosA: a better way to examine Mn(II).
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Multifrequency Pulsed EPR Studies of Biologically Relevant Manganese(II) Complexes
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EasySpin, a comprehensive software package for spectral simulation and analysis in EPR.
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Low specificity of metal ion binding in the metal ion core of a folded RNA.
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Coordination environment of a site-bound metal ion in the hammerhead ribozyme determined by 15N and 2H ESEEM spectroscopy.
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Enzyme control of small-molecule coordination in FosA as revealed by 31P pulsed ENDOR and ESE-EPR.
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Asp537 and Asp812 in bacteriophage T7 RNA polymerase as metal ion-binding sites studied by EPR, flow-dialysis, and transcription
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7 January 2021
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Identifiers
DOI
10.1016/S0076-6879(09)68016-2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
PubMed publication ID
20946777
1 reference
stated in
Europe PubMed Central
PubMed publication ID
20946777
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20946777%20AND%20SRC:MED&resulttype=core&format=json
retrieved
15 February 2020
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