(Q89475630)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29986055%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

title

Histone variant H2A.Z deposition and acetylation directs the canonical Notch signaling response (English)

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5 April 2020

author

Irene Gutierrez-Perez

5

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5 April 2020

Thorsten Stiewe

7

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María Domínguez Castellano

5 April 2020

14

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5 April 2020

author name string

Benedetto Daniele Giaimo

1

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5 April 2020

Francesca Ferrante

2

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5 April 2020

Diana M Vallejo

3

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5 April 2020

Kerstin Hein

4

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5 April 2020

Andrea Nist

6

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5 April 2020

Gerhard Mittler

8

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5 April 2020

Susanne Herold

9

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5 April 2020

Tobias Zimmermann

10

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5 April 2020

Marek Bartkuhn

11

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5 April 2020

Peggy Schwarz

12

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5 April 2020

Franz Oswald

13

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5 April 2020

Tilman Borggrefe

15

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5 April 2020

publication date

1 September 2018

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5 April 2020

published in

Nucleic Acids Research

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5 April 2020

volume

46

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5 April 2020

issue

16

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5 April 2020

page(s)

8197-8215

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Creative Commons Attribution-NonCommercial 4.0 International

5 April 2020

copyright license

start time

9 July 2018

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

ImageJ

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC6144792/fullTextXML

inferred from PubMed Central ID database lookup

cites work

Interaction between Wingless and Notch signaling pathways mediated by dishevelled.

1 reference

12 December 2020

Delta is a ventral to dorsal signal complementary to Serrate, another Notch ligand, in Drosophila wing formation

1 reference

12 December 2020

decapentaplegic and wingless are regulated by eyes absent and eyegone and interact to direct the pattern of retinal differentiation in the eye disc.

1 reference

12 December 2020

Dorsal-ventral signaling in the Drosophila eye.

1 reference

12 December 2020

Fringe is essential for mirror symmetry and morphogenesis in the Drosophila eye.

1 reference

12 December 2020

A dorsal/ventral boundary established by Notch controls growth and polarity in the Drosophila eye.

1 reference

12 December 2020

Notch signaling: cell fate control and signal integration in development

1 reference

12 December 2020

SKIP, a CBF1-associated protein, interacts with the ankyrin repeat domain of NotchIC To facilitate NotchIC function

1 reference

12 December 2020

Functional interaction between the mouse notch1 intracellular region and histone acetyltransferases PCAF and GCN5

1 reference

12 December 2020

MAML1, a human homologue of Drosophila mastermind, is a transcriptional co-activator for NOTCH receptors

1 reference

12 December 2020

Transcriptional repression by suppressor of hairless involves the binding of a hairless-dCtBP complex in Drosophila.

1 reference

12 December 2020

The p400 complex is an essential E1A transformation target

1 reference

12 December 2020

p300 acts as a transcriptional coactivator for mammalian Notch-1

1 reference

12 December 2020

Default repression and Notch signaling: Hairless acts as an adaptor to recruit the corepressors Groucho and dCtBP to Suppressor of Hairless

1 reference

12 December 2020

Identification of a family of mastermind-like transcriptional coactivators for mammalian notch receptors

1 reference

12 December 2020

SHARP is a novel component of the Notch/RBP-Jkappa signalling pathway

1 reference

12 December 2020

Suppressors of the egg-laying defective phenotype of sel-12 presenilin mutants implicate the CoREST corepressor complex in LIN-12/Notch signaling in C. elegans

1 reference

12 December 2020

ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex

1 reference

12 December 2020

Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans

1 reference

12 December 2020

A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin

1 reference

12 December 2020

The highly conserved and multifunctional NuA4 HAT complex

1 reference

12 December 2020

Bioconductor: open software development for computational biology and bioinformatics

1 reference

12 December 2020

Activating mutations of NOTCH1 in human T cell acute lymphoblastic leukemia

1 reference

12 December 2020

Acetylation by Tip60 is required for selective histone variant exchange at DNA lesions

1 reference

12 December 2020

The mammalian YL1 protein is a shared subunit of the TRRAP/TIP60 histone acetyltransferase and SRCAP complexes

1 reference

12 December 2020

The p400 E1A-associated protein is a novel component of the p53 --> p21 senescence pathway

1 reference

12 December 2020

Transcription-induced chromatin remodeling at the c-myc gene involves the local exchange of histone H2A.Z.

1 reference

12 December 2020

Human SRCAP and Drosophila melanogaster DOM are homologs that function in the notch signaling pathway

1 reference

12 December 2020

The replacement histone H2A.Z in a hyperacetylated form is a feature of active genes in the chicken

1 reference

12 December 2020

Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss

1 reference

12 December 2020

Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin

1 reference

12 December 2020

Regulation of Notch signalling by non-visual beta-arrestin

1 reference

12 December 2020

RBP-Jkappa/SHARP recruits CtIP/CtBP corepressors to silence Notch target genes

1 reference

12 December 2020

Hairless-mediated repression of notch target genes requires the combined activity of Groucho and CtBP corepressors

1 reference

12 December 2020

Characterization of histone H2A and H2B variants and their post-translational modifications by mass spectrometry

1 reference

12 December 2020

Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling

1 reference

12 December 2020

The transcriptional histone acetyltransferase cofactor TRRAP associates with the MRN repair complex and plays a role in DNA double-strand break repair

1 reference

12 December 2020

Epigenetic silencers and Notch collaborate to promote malignant tumours by Rb silencing.

1 reference

12 December 2020

Nipped-A, the Tra1/TRRAP subunit of the Drosophila SAGA and Tip60 complexes, has multiple roles in Notch signaling during wing development

1 reference

12 December 2020

Crystal structure of the CSL-Notch-Mastermind ternary complex bound to DNA.

1 reference

12 December 2020

The Saccharomyces cerevisiae histone H2A variant Htz1 is acetylated by NuA4.

1 reference

12 December 2020

Acetylation of H2AZ Lys 14 is associated with genome-wide gene activity in yeast

1 reference

12 December 2020

Quantitative proteomic analysis of post-translational modifications of human histones

1 reference

12 December 2020

c-Myc is an important direct target of Notch1 in T-cell acute lymphoblastic leukemia/lymphoma

1 reference

12 December 2020

Developmental activation of the lysozyme gene in chicken macrophage cells is linked to core histone acetylation at its enhancer elements.

1 reference

12 December 2020

Notch signalling: a simple pathway becomes complex

1 reference

12 December 2020

Notch activation stimulates transient and selective binding of Su(H)/CSL to target enhancers

1 reference

12 December 2020

Monoubiquitylation of H2A.Z distinguishes its association with euchromatin or facultative heterochromatin

1 reference

12 December 2020

p21 transcription is regulated by differential localization of histone H2A.Z.

1 reference

12 December 2020

Mutational loss of PTEN induces resistance to NOTCH1 inhibition in T-cell leukemia

1 reference

12 December 2020

Interaction of the glucocorticoid receptor with the chromatin landscape

1 reference

12 December 2020

Dynamic histone variant exchange accompanies gene induction in T cells

1 reference

12 December 2020

The canonical Notch signaling pathway: unfolding the activation mechanism

1 reference

12 December 2020

Acetylation of vertebrate H2A.Z and its effect on the structure of the nucleosome

1 reference

12 December 2020

Histone H2A.Z is essential for estrogen receptor signaling

1 reference

12 December 2020

Cooperative action of TIP48 and TIP49 in H2A.Z exchange catalyzed by acetylation of nucleosomal H2A.

1 reference

12 December 2020

Histone demethylase KDM5A is an integral part of the core Notch-RBP-J repressor complex

1 reference

12 December 2020

The SANT domain of p400 ATPase represses acetyltransferase activity and coactivator function of TIP60 in basal p21 gene expression

1 reference

12 December 2020

A combined ex vivo and in vivo RNAi screen for notch regulators in Drosophila reveals an extensive notch interaction network.

1 reference

12 December 2020

Wingless modulates the ligand independent traffic of Notch through Dishevelled.

1 reference

12 December 2020

Roles for H2A.Z and its acetylation in GAL1 transcription and gene induction, but not GAL1-transcriptional memory

1 reference

12 December 2020

RITA, a novel modulator of Notch signalling, acts via nuclear export of RBP-J.

1 reference

12 December 2020

USP10 deubiquitylates the histone variant H2A.Z and both are required for androgen receptor-mediated gene activation

1 reference

12 December 2020

A SIRT1-LSD1 corepressor complex regulates Notch target gene expression and development

1 reference

12 December 2020

Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia

1 reference

12 December 2020

Genome-wide analysis reveals conserved and divergent features of Notch1/RBPJ binding in human and murine T-lymphoblastic leukemia cells

1 reference

12 December 2020

Acetylation of H2A.Z is a key epigenetic modification associated with gene deregulation and epigenetic remodeling in cancer

1 reference

12 December 2020

clusterProfiler: an R package for comparing biological themes among gene clusters.

1 reference

12 December 2020

NOTCH1 nuclear interactome reveals key regulators of its transcriptional activity and oncogenic function.

1 reference

12 December 2020

H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions

1 reference

12 December 2020

STAR: ultrafast universal RNA-seq aligner

1 reference

12 December 2020

Dishevelled limits Notch signalling through inhibition of CSL

1 reference

12 December 2020

A combination of H2A.Z and H4 acetylation recruits Brd2 to chromatin during transcriptional activation

1 reference

12 December 2020

H2A.Z facilitates access of active and repressive complexes to chromatin in embryonic stem cell self-renewal and differentiation.

1 reference

12 December 2020

SETD6 monomethylates H2AZ on lysine 7 and is required for the maintenance of embryonic stem cell self-renewal

1 reference

12 December 2020

RNA helicase Ddx5 and the noncoding RNA SRA act as coactivators in the Notch signaling pathway

1 reference

12 December 2020

A targeted genetic modifier screen links the SWI2/SNF2 protein domino to growth and autophagy genes in Drosophila melanogaster

1 reference

12 December 2020

The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote

1 reference

12 December 2020

TIP48/Reptin and H2A.Z requirement for initiating chromatin remodeling in estrogen-activated transcription

1 reference

12 December 2020

Dampening the signals transduced through hedgehog via microRNA miR-7 facilitates notch-induced tumourigenesis.

1 reference

12 December 2020

Software for computing and annotating genomic ranges

1 reference

12 December 2020

An epigenetic mechanism of resistance to targeted therapy in T cell acute lymphoblastic leukemia

1 reference

12 December 2020

The Tumor Suppressor Ikaros Shapes the Repertoire of Notch Target Genes in T Cells

1 reference

12 December 2020

Trimmomatic: a flexible trimmer for Illumina sequence data

1 reference

12 December 2020

Improved vectors and genome-wide libraries for CRISPR screening

1 reference

12 December 2020

STRING v10: protein-protein interaction networks, integrated over the tree of life

1 reference

12 December 2020

Loss of the Notch effector RBPJ promotes tumorigenesis

1 reference

12 December 2020

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

1 reference

12 December 2020

HISAT: a fast spliced aligner with low memory requirements

1 reference

12 December 2020

Site-specific methylation of Notch1 controls the amplitude and duration of the Notch1 response

1 reference

12 December 2020

Expression of Non-acetylatable H2A.Z in Myoblast Cells Blocks Myoblast Differentiation through Disruption of MyoD Expression

1 reference

12 December 2020

The histone variant H2A.Z is an important regulator of enhancer activity

1 reference

12 December 2020

Tip60 complex binds to active Pol II promoters and a subset of enhancers and co-regulates the c-Myc network in mouse embryonic stem cells

1 reference

12 December 2020

The Notch intracellular domain integrates signals from Wnt, Hedgehog, TGFβ/BMP and hypoxia pathways

1 reference

12 December 2020

H2A.Z.1 Monoubiquitylation Antagonizes BRD2 to Maintain Poised Chromatin in ESCs

1 reference

12 December 2020

A phospho-dependent mechanism involving NCoR and KMT2D controls a permissive chromatin state at Notch target genes.

1 reference

12 December 2020

The chromatin modifying complex CoREST/LSD1 negatively regulates notch pathway during cerebral cortex development

1 reference

12 December 2020

Roles for the Histone Modifying and Exchange Complex NuA4 in Cell Cycle Progression in Drosophila melanogaster

1 reference

12 December 2020

Notch signalling in context

1 reference

12 December 2020

2016 update of the PRIDE database and its related tools.

1 reference

12 December 2020

Dynamic chromatin regulation at Notch target genes

1 reference

12 December 2020

DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome.

1 reference

12 December 2020

Heterodimerization of AML1/ETO with CBFβ is required for leukemogenesis but not for myeloproliferation

1 reference

12 December 2020

Chromatin Immunoprecipitation (ChIP) in Mouse T-cell Lines

1 reference

12 December 2020

RBPJ/CBF1 interacts with L3MBTL3/MBT1 to promote repression of Notch signaling via histone demethylase KDM1A/LSD1.

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKY551

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29986055%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

1 reference

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5 April 2020

PubMed publication ID

29986055

1 reference