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English
The ENCODE Blacklist: Identification of Problematic Regions of the Genome
scientific article published on 27 June 2019
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scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
title
The ENCODE Blacklist: Identification of Problematic Regions of the Genome
(English)
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
author
Anshul Kundaje
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
Alan P. Boyle
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
author name string
Haley M Amemiya
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
publication date
27 June 2019
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
published in
Scientific Reports
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
volume
9
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
issue
1
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
page(s)
9354
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
cites work
Umap and Bismap: quantifying genome and methylome mappability
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6597582
retrieved
11 February 2021
Deciphering ENCODE.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6597582
retrieved
11 February 2021
A comparative encyclopedia of DNA elements in the mouse genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6597582
retrieved
11 February 2021
Characterizing regions in the human genome unmappable by next-generation-sequencing at the read length of 1000 bases.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6597582
retrieved
11 February 2021
Comparative analysis of regulatory information and circuits across distant species
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6597582
retrieved
11 February 2021
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6597582
retrieved
11 February 2021
An integrated encyclopedia of DNA elements in the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6597582
retrieved
11 February 2021
False positive peaks in ChIP-seq and other sequencing-based functional assays caused by unannotated high copy number regions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6597582
retrieved
11 February 2021
Mapping accessible chromatin regions using Sono-Seq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6597582
retrieved
11 February 2021
The Sequence Alignment/Map format and SAMtools
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6597582
retrieved
11 February 2021
Identifiers
DOI
10.1038/S41598-019-45839-Z
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
PMCID
6597582
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
PubMed ID
31249361
1 reference
stated in
Europe PubMed Central
PMCID
6597582
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31249361%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 May 2020
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