(Q102058649)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33188013%20AND%20SRC:MED&resulttype=core&format=json

18 November 2020

title

Dedifferentiation and neuronal repression define familial Alzheimer's disease (English)

1 reference

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18 November 2020

1

1 reference

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18 November 2020

Gary Schroth

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33188013%20AND%20SRC:MED&resulttype=core&format=json

18 November 2020

Shauna H Yuan

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33188013%20AND%20SRC:MED&resulttype=core&format=json

18 November 2020

Shankar Subramaniam

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33188013%20AND%20SRC:MED&resulttype=core&format=json

18 November 2020

author name string

Qing Liu

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33188013%20AND%20SRC:MED&resulttype=core&format=json

18 November 2020

Douglas R Galasko

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33188013%20AND%20SRC:MED&resulttype=core&format=json

18 November 2020

Steven L Wagner

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33188013%20AND%20SRC:MED&resulttype=core&format=json

18 November 2020

publication date

13 November 2020

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18 November 2020

1 reference

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18 November 2020

volume

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33188013%20AND%20SRC:MED&resulttype=core&format=json

18 November 2020

issue

46

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33188013%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 4.0 International

18 November 2020

copyright license

start time

13 November 2020

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Probing sporadic and familial Alzheimer's disease using induced pluripotent stem cells

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Coupling of energy metabolism and synaptic transmission at the transcriptional level: role of nuclear respiratory factor 1 in regulating both cytochrome c oxidase and NMDA glutamate receptor subunit genes

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An updated role of microRNA-124 in central nervous system disorders: a review

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PRRX1- and PRRX2-positive mesenchymal stem/progenitor cells are involved in vasculogenesis during rat embryonic pituitary development

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A clustering approach for identification of enriched domains from histone modification ChIP-Seq data

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Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences

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The transcription factor Pou3f1 promotes neural fate commitment via activation of neural lineage genes and inhibition of external signaling pathways.

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Myt1l safeguards neuronal identity by actively repressing many non-neuronal fates

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A framework for oligonucleotide microarray preprocessing.

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Near-optimal probabilistic RNA-seq quantification

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Pioneer Factor NeuroD1 Rearranges Transcriptional and Epigenetic Profiles to Execute Microglia-Neuron Conversion

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1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

The establishment of neuronal properties is controlled by Sox4 and Sox11

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1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

limma powers differential expression analyses for RNA-sequencing and microarray studies

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1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Regulation of microRNA function in somatic stem cell proliferation and differentiation

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1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Identification of transcription factor binding sites using ATAC-seq

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1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Sequentially acting Sox transcription factors in neural lineage development

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1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Writing, erasing and reading histone lysine methylations.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Cloning of a gene bearing missense mutations in early-onset familial Alzheimer's disease

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1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Testing significance relative to a fold-change threshold is a TREAT.

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1 April 2022

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Crunch: integrated processing and modeling of ChIP-seq data in terms of regulatory motifs

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1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

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1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Transcription factor binding dynamics during human ES cell differentiation

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

miRTarBase: a database curates experimentally validated microRNA-target interactions

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

ChIP-Enrich: gene set enrichment testing for ChIP-seq data

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

An atlas of active enhancers across human cell types and tissues

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Effect of potent γ-secretase modulator in human neurons derived from multiple presenilin 1-induced pluripotent stem cell mutant carriers

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

REST and its corepressors mediate plasticity of neuronal gene chromatin throughout neurogenesis.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Chromatin establishes an immature version of neuronal protocadherin selection during the naive-to-primed conversion of pluripotent stem cells

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

ISMARA: automated modeling of genomic signals as a democracy of regulatory motifs

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Molecular and functional variation in iPSC-derived sensory neurons.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

The Sequence Alignment/Map format and SAMtools

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

ChIP-Seq Data Mining: Remarkable Differences in NRSF/REST Target Genes between Human ESC and ESC-Derived Neurons

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Function and regulation of CREB family transcription factors in the nervous system

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

The presenilin-1 ΔE9 mutation results in reduced γ-secretase activity, but not total loss of PS1 function, in isogenic human stem cells

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

NeuroD1 reprograms chromatin and transcription factor landscapes to induce the neuronal program

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

A Gata3-Mafb transcriptional network directs post-synaptic differentiation in synapses specialized for hearing

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Cell-surface marker signatures for the isolation of neural stem cells, glia and neurons derived from human pluripotent stem cells

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Analysis of computational footprinting methods for DNase sequencing experiments.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

bHLH transcription factors in neural development, disease, and reprogramming.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Pleiotrophin antagonizes Brd2 during neuronal differentiation.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

The genetic landscape of Alzheimer disease: clinical implications and perspectives

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Reactome: a database of reactions, pathways and biological processes

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

A preliminary study of the whole-genome expression profile of sporadic and monogenic early-onset Alzheimer's disease

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Tauopathy-associated PERK alleles are functional hypomorphs that increase neuronal vulnerability to ER stress

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

ReMap 2018: an updated atlas of regulatory regions from an integrative analysis of DNA-binding ChIP-seq experiments

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

YAP1 Exerts Its Transcriptional Control via TEAD-Mediated Activation of Enhancers

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Metascape provides a biologist-oriented resource for the analysis of systems-level datasets

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Identification of myelin transcription factor 1 (MyT1) as a subunit of the neural cell type-specific lysine-specific demethylase 1 (LSD1) complex.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Cux2 (Cutl2) integrates neural progenitor development with cell-cycle progression during spinal cord neurogenesis

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Genome-wide association between YAP/TAZ/TEAD and AP-1 at enhancers drives oncogenic growth

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

The tumor suppressor Pml regulates cell fate in the developing neocortex

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

nVenn: generalized, quasi-proportional Venn and Euler diagrams

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Clinical Association of White Matter Hyperintensities Localization in a Mexican Family with Spastic Paraparesis Carrying the PSEN1 A431E Mutation

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Depletion of the AD Risk Gene SORL1 Selectively Impairs Neuronal Endosomal Traffic Independent of Amyloidogenic APP Processing

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Functional characterization of somatic mutations in cancer using network-based inference of protein activity

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

TFEB dysregulation as a driver of autophagy dysfunction in neurodegenerative disease: Molecular mechanisms, cellular processes, and emerging therapeutic opportunities

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

SwissRegulon, a database of genome-wide annotations of regulatory sites: recent updates

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Regulation of chromatin by histone modifications

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Discovery of directional and nondirectional pioneer transcription factors by modeling DNase profile magnitude and shape

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

MicroRNA-mediated switching of chromatin-remodelling complexes in neural development

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Differential oestrogen receptor binding is associated with clinical outcome in breast cancer

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Molecular mechanisms of epithelial-mesenchymal transition

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

The DREAM complex: master coordinator of cell cycle-dependent gene expression.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Cutadapt removes adapter sequences from high-throughput sequencing reads

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Type I interferon [corrected] gene induction by the interferon regulatory factor family of transcription factors

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

ENCODE data at the ENCODE portal

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Alzheimer disease: Aβ-independent processes-rethinking preclinical AD.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

A single NFκB system for both canonical and non-canonical signaling

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Cooperative Transcription Factor Induction Mediates Hemogenic Reprogramming.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

plyranges: a grammar of genomic data transformation

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Benchmark and integration of resources for the estimation of human transcription factor activities

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Animal models of neurodegenerative diseases

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Early onset Alzheimer's disease in a South American pedigree from Argentina.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

KLF family members regulate intrinsic axon regeneration ability.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Comparison of REST cistromes across human cell types reveals common and context-specific functions

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

HMMRATAC: a Hidden Markov ModeleR for ATAC-seq

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

A context-specific cardiac β-catenin and GATA4 interaction influences TCF7L2 occupancy and remodels chromatin driving disease progression in the adult heart.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

ROAST: rotation gene set tests for complex microarray experiments

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Gene ontology: tool for the unification of biology

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Network plasticity of pluripotency transcription factors in embryonic stem cells.

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Topconfects: a package for confident effect sizes in differential expression analysis provides a more biologically useful ranked gene list

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Comparative sequence analysis reveals an intricate network among REST, CREB and miRNA in mediating neuronal gene expression

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Molecular insights into the pathogenesis of Alzheimer's disease and its relationship to normal aging

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Summaries of Affymetrix GeneChip probe level data

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

MicroRNAs Overcome Cell Fate Barrier by Reducing EZH2-Controlled REST Stability during Neuronal Conversion of Human Adult Fibroblasts

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

The genetics of Alzheimer disease

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

NOTCH1 regulates matrix gla protein and calcification gene networks in human valve endothelium

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

GimmeMotifs: a de novo motif prediction pipeline for ChIP-sequencing experiments

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

deepTools2: a next generation web server for deep-sequencing data analysis

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

DUSP4 regulates neuronal differentiation and calcium homeostasis by modulating ERK1/2 phosphorylation

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1126/SCIADV.ABA5933

Identifiers

DOI

10.1126/SCIADV.ABA5933

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33188013%20AND%20SRC:MED&resulttype=core&format=json

18 November 2020

1 reference