(Q104456791)

title

Characterization of Euglenaformis gen. nov. and the chloroplast genome of Euglenaformis [Euglena] proxima (Euglenophyta) (English)

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Matthew S. Bennett

1

Department of Plant Biology, Michigan State University, Plant Biology Laboratories, 612 Wilson Rd, Room 166, East Lansing, MI 48824, USA

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Krystle E. Wiegert

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2

affiliation string

Department of Plant Biology, Michigan State University, Plant Biology Laboratories, 612 Wilson Rd, Room 166, East Lansing, MI 48824, USA

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Richard E. Triemer

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3

affiliation string

Department of Plant Biology, Michigan State University, Plant Biology Laboratories, 612 Wilson Rd, Room 166, East Lansing, MI 48824, USA

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language of work or name

English

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publication date

January 2014

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volume

53

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issue

1

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page(s)

66-73

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A NEW METHOD FOR OBTAINING NUCLEAR GENE SEQUENCES FROM FIELD SAMPLES AND TAXONOMIC REVISIONS OF THE PHOTOSYNTHETIC EUGLENOIDS LEPOCINCLIS (EUGLENA) HELICOIDEUS AND LEPOCINCLIS (PHACUS) HORRIDUS (EUGLENOPHYTA)(1).

cites work

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Rfam 11.0: 10 years of RNA families

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BLAST+: architecture and applications

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Mauve: multiple alignment of conserved genomic sequence with rearrangements

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jModelTest 2: more models, new heuristics and parallel computing

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Complete sequence of Euglena gracilis chloroplast DNA

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The plastid genome of Eutreptiella provides a window into the process of secondary endosymbiosis of plastid in euglenids

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MULTIGENE ANALYSES OF PHOTOSYNTHETIC EUGLENOIDS AND NEW FAMILY, PHACACEAE (EUGLENALES)1

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RNAmmer: consistent and rapid annotation of ribosomal RNA genes

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Reconstructing euglenoid evolutionary relationships using three genes: nuclear SSU and LSU, and chloroplast SSU rDNA sequences and the description of Euglenaria gen. nov. (Euglenophyta).

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PHYLOGENY OF PHOTOSYNTHETIC EUGLENOPHYTES BASED ON COMBINED CHLOROPLAST AND CYTOPLASMIC SSU RDNA SEQUENCE ANALYSIS1

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Characterization of the unique intron-exon junctions of Euglena gene(s) encoding the polyprotein precursor to the light-harvesting chlorophyll a/b binding protein of photosystem II.

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The Pfam protein families database

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MrBayes 3: Bayesian phylogenetic inference under mixed models

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The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

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A rapid bootstrap algorithm for the RAxML Web servers

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MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

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The Chloroplast Genomes of the Green Algae Pyramimonas, Monomastix, and Pycnococcus Shed New light on the Evolutionary History of Prasinophytes and the Origin of the Secondary Chloroplasts of Euglenids

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Evolution of the chloroplast genome in photosynthetic euglenoids: a comparison of Eutreptia viridis and Euglena gracilis (Euglenophyta).

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Tracing patterns of chloroplast evolution in euglenoids: contributions from Colacium vesiculosum and Strombomonas acuminata (Euglenophyta).

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Automatic annotation of organellar genomes with DOGMA

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Identifiers

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