(Q21089598)

English

The genome of the obligate intracellular parasite Trachipleistophora hominis: new insights into microsporidian genome dynamics and reductive evolution

scientific article

The Genome of the Obligate Intracellular Parasite Trachipleistophora hominis: New Insights into Microsporidian Genome Dynamics and Reductive Evolution

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17 February 2020

The genome of the obligate intracellular parasite Trachipleistophora hominis: new insights into microsporidian genome dynamics and reductive evolution (English)

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17 February 2020

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Dicer recognizes the 5' end of RNA for efficient and accurate processing

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Database resources of the National Center for Biotechnology Information

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The Pfam protein families database

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Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions

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SHRiMP: accurate mapping of short color-space reads

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19 March 2017

Genomic survey of the non-cultivatable opportunistic human pathogen, Enterocytozoon bieneusi

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19 March 2017

The Transporter Classification Database: recent advances

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SMART 6: recent updates and new developments

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Microsporidia evolved from ancestral sexual fungi

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NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

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MEME: discovering and analyzing DNA and protein sequence motifs

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metaSHARK: software for automated metabolic network prediction from DNA sequence and its application to the genomes of Plasmodium falciparum and Eimeria tenella

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Enzyme-specific profiles for genome annotation: PRIAM

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19 March 2017

The COG database: an updated version includes eukaryotes

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The TIGRFAMs database of protein families

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The Protein Data Bank

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KEGG: Kyoto Encyclopedia of Genes and Genomes

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Prefoldin, a chaperone that delivers unfolded proteins to cytosolic chaperonin

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Spectral clustering of protein sequences

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The New Higher Level Classification of Eukaryotes with Emphasis on the Taxonomy of Protists

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Diversity and reductive evolution of mitochondria among microbial eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

ABC transporters in Saccharomyces cerevisiae and their interactors: new technology advances the biology of the ABCC (MRP) subfamily

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Distinct and overlapping roles for two Dicer-like proteins in the RNA interference pathways of the ancient eukaryote Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Function and biogenesis of iron-sulphur proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Transposable elements and factors influencing their success in eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Evidence of a reduced and modified mitochondrial protein import apparatus in microsporidian mitosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

PEDANT covers all complete RefSeq genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Quantification of structures and gold labeling in transmission electron microscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

A novel route for ATP acquisition by the remnant mitochondria of Encephalitozoon cuniculi.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Genome sequence surveys of Brachiola algerae and Edhazardia aedis reveal microsporidia with low gene densities.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Conserved themes in small-RNA-mediated transposon control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Surface antigens and potential virulence factors from parasites detected by comparative genomics of perfect amino acid repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Proteases in parasitic diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

An unusual Dicer-like1 protein fuels the RNA interference pathway in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Microsporidian mitosomes retain elements of the general mitochondrial targeting system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Streamlining and simplification of microbial genome architecture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Proteomic analysis of the eukaryotic parasite Encephalitozoon cuniculi (microsporidia): a reference map for proteins expressed in late sporogonial stages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Evolution of the ATP-binding cassette (ABC) transporter superfamily in vertebrates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

A high frequency of overlapping gene expression in compacted eukaryotic genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

The microsporidian polar tube: a highly specialised invasion organelle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Molecular phylogeny of the Microsporidia: ecological, ultrastructural and taxonomic considerations

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002979

21 January 2018

Modeling compositional heterogeneity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

A comprehensive proteome map of growing Bacillus subtilis cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Sequence survey of the genome of the opportunistic microsporidian pathogen, Vittaforma corneae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Bacteriocin diversity: ecological and evolutionary perspectives

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

PLS1, a gene encoding a tetraspanin-like protein, is required for penetration of rice leaf by the fungal pathogen Magnaporthe grisea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Identification of a chlamydial protease-like activity factor responsible for the degradation of host transcription factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Non-mitochondrial ATP transport

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Myositis associated with a newly described microsporidian, Trachipleistophora hominis, in a patient with AIDS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

Development and ultrastructure of Trachipleistophora hominis n.g., n.sp. after in vitro isolation from an AIDS patient and inoculation into athymic mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

12 September 2017

The interaction network of the chaperonin CCT

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

27 September 2017

Identification of novel developmentally regulated genes in Encephalitozoon cuniculi: an endochitinase, a chitin-synthase, and two subtilisin-like proteases are induced during meront-to-sporont differentiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

27 September 2017

Proteolytic activity in Encephalitozoon cuniculi sporogonial stages: predominance of metallopeptidases including an aminopeptidase-P-like enzyme.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

27 September 2017

PhyloGenie: automated phylome generation and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

27 September 2017

TransportDB: a relational database of cellular membrane transport systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

27 September 2017

Zygomycetes, microsporidia, and the evolutionary ancestry of sex determination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

30 May 2018

Immunolocalization of an alternative respiratory chain in Antonospora (Paranosema) locustae spores: mitosomes retain their role in microsporidial energy metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

30 May 2018

Opportunistic nature of the mammalian microsporidia: experimental transmission of Trachipleistophora extenrec (Fungi: Microsporidia) between mammalian and insect hosts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

30 May 2018

Efficient computation of the phylogenetic likelihood function on multi-gene alignments and multi-core architectures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

30 May 2018

The crucial role of the Pls1 tetraspanin during ascospore germination in Podospora anserina provides an example of the convergent evolution of morphogenetic processes in fungal plant pathogens and saprobes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

30 May 2018

Phylogenetic relationships of Pleistophora-like microsporidia based on small subunit ribosomal DNA sequences and implications for the source of trachipleistophora hominis infections

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

30 May 2018

Genes coding for reverse transcriptase, DNA-directed RNA polymerase, and chitin synthase from the microsporidian Spraguea lophii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

30 May 2018

Constrained intron structures in a microsporidian

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002979

21 January 2018

Mosquito (Diptera: Culicidae) host compatibility and vector competency for the human myositic parasite Trachipleistophora hominis (Phylum Microspora).

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002979

21 January 2018

Analogs of the Golgi complex in microsporidia: structure and avesicular mechanisms of function.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002979

21 January 2018

Microsporidian polar tube proteins: highly divergent but closely linked genes encode PTP1 and PTP2 in members of the evolutionarily distant Antonospora and Encephalitozoon groups

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002979

21 January 2018

Identification and distinct regulation of yeast TATA box-containing genes

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002979

21 January 2018

Can data provenance go the full monty?

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002979

21 January 2018

Compositional pressure and translational selection determine codon usage in the extremely GC-poor unicellular eukaryote Entamoeba histolytica.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002979

21 January 2018

Comparative profiling of overlapping transcription in the compacted genomes of microsporidia Antonospora locustae and Encephalitozoon cuniculi

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002979

21 January 2018

"Polar vesicles" of microsporidia are mitochondrial remnants ("mitosomes")?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3486916

29 November 2018

Horizontal Gene Transfer and the Evolution of Parasitic Protozoa

1 reference

https://pubmed.ncbi.nlm.nih.gov/23133373

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

[Study by electron microscope of the morphology and development of some Microsporidia]

1 reference

https://pubmed.ncbi.nlm.nih.gov/23133373

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activities of enzymes of carbohydrate and energy metabolism of the spores of the microsporidian, Nosema grylli

1 reference

https://pubmed.ncbi.nlm.nih.gov/23133373

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Type II CAAX prenyl endopeptidases belong to a novel superfamily of putative membrane-bound metalloproteases

1 reference

https://pubmed.ncbi.nlm.nih.gov/23133373

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PPAT.1002979

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23133373%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

release_rkum2g7hoffi7avi4g6357cpgm

1 reference

https://api.fatcat.wiki/v0/release/rkum2g7hoffi7avi4g6357cpgm

24 November 2022

based on heuristic

mapped directly with Wikidata item

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23133373%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

PubMed publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23133373%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

ResearchGate publication ID

0 references

Sitelinks

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