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Transcript length bias in RNA-seq data confounds systems biology

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Transcript length bias in RNA-seq data confounds systems biology (English)

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1

Alicia Oshlack

Alicia

Oshlack

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Dimensions Publication ID

7 August 2022

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Matthew J Wakefield

Matthew J

Wakefield

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Dimensions

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1045373440

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7 August 2022

language of work or name

English

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publication date

2009

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Biology Direct

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4

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1

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page(s)

14

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cites work

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

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PubMed Central

reference URL

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19 March 2017

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

1 reference

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678084

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19 March 2017

Alternative isoform regulation in human tissue transcriptomes

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678084

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19 March 2017

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

1 reference

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PubMed Central

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19 March 2017

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

1 reference

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678084

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19 March 2017

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678084

retrieved

19 March 2017

Stem cell transcriptome profiling via massive-scale mRNA sequencing

1 reference

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678084

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19 March 2017

A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome

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PubMed Central

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retrieved

7 April 2017

The significance of digital gene expression profiles

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678084

retrieved

7 April 2017

Statistical issues in the analysis of Illumina data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678084

retrieved

12 September 2017

Stochastic models inspired by hybridization theory for short oligonucleotide arrays.

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678084

retrieved

29 November 2018

Identifiers

DOI

10.1186/1745-6150-4-14

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1403876

Dimensions Publication ID

1045373440

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OpenCitations bibliographic resource ID

1403876

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1403876

PubMed publication ID

19371405

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stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1403876

ResearchGate publication ID

24282377

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(Q21093194)

Transcript length bias in RNA-seq data confounds systems biology

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