(Q21093602)

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The complete chloroplast genome sequence of the chlorophycean green alga Scenedesmus obliquus reveals a compact gene organization and a biased distribution of genes on the two DNA strands

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scholarly article

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The complete chloroplast genome sequence of the chlorophycean green alga Scenedesmus obliquus reveals a compact gene organization and a biased distribution of genes on the two DNA strands (English)

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1 reference

based on heuristic

inferred from title

Scenedesmus obliquus

object named as

Scenedesmus obliquus

1 reference

based on heuristic

inferred from title

object named as

Claude Lemieux

3

author given names

Claude

author last names

Lemieux

1 reference

Dimensions Publication ID

10 August 2022

author name string

Jean-Charles de Cambiaire

1

author given names

Jean-Charles

author last names

de Cambiaire

1 reference

Dimensions Publication ID

10 August 2022

Christian Otis

2

author given names

Christian

author last names

Otis

1 reference

Dimensions Publication ID

10 August 2022

Monique Turmel

4

author given names

Monique

author last names

Turmel

1 reference

Dimensions Publication ID

10 August 2022

language of work or name

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publication date

2006

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BMC Evolutionary Biology

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6

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1

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37

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https://scigraph.springernature.com/pub.10.1186/1471-2148-6-37

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2148-6-37

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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EMBOSS: the European Molecular Biology Open Software Suite

1 reference

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1 reference

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1 reference

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1 reference

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Adaptive evolution of chloroplast genome structure inferred using a parametric bootstrap approach

1 reference

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Apicoplast genome of the coccidian Eimeria tenella

1 reference

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Phylogenetic relationships among group II intron ORFs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513399

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513399

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Strand asymmetry and codon usage bias in the chloroplast genome of Euglena gracilis

1 reference

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1 reference

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Evolutionarily conserved and functionally important residues in the I-CeuI homing endonuclease

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513399

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513399

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513399

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513399

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513399

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1513399

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1 reference

https://pubmed.ncbi.nlm.nih.gov/16638149

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based on heuristic

inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/16638149

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The cyanobacterial origin and vertical transmission of the plastid tRNA(Leu) group-I intron

1 reference

https://pubmed.ncbi.nlm.nih.gov/16638149

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2148-6-37

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Dimensions Publication ID

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2148-6-37

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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