(Q21131415)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

title

A genome-wide approach to discovery of small RNAs involved in regulation of virulence in Vibrio cholerae (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

0 references

0 references

1

Evan S Bradley

Evan S

Bradley

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Kip Bodi

2

Kip

Bodi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Ayman M Ismail

series ordinal

3

author given names

Ayman M

author last names

Ismail

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Andrew Camilli

series ordinal

4

author given names

Andrew

author last names

Camilli

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

language of work or name

English

0 references

publication date

14 July 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

page(s)

e1002126

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

issue

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

8 February 2020

copyright license

start time

14 July 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A bistable switch and anatomical site control Vibrio cholerae virulence gene expression in the intestine

1 reference

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Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq

19 March 2017

1 reference

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A new Vibrio cholerae sRNA modulates colonization and affects release of outer membrane vesicles

19 March 2017

1 reference

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Identification of small Hfq-binding RNAs in Listeria monocytogenes

19 March 2017

1 reference

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Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems

19 March 2017

1 reference

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Structure of Vibrio cholerae ToxT reveals a mechanism for fatty acid regulation of virulence genes

19 March 2017

1 reference

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Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter

19 March 2017

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The primary transcriptome of the major human pathogen Helicobacter pylori

19 March 2017

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A conserved small RNA promotes silencing of the outer membrane protein YbfM

19 March 2017

1 reference

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A rough guide to the non-coding RNA world of Salmonella

19 March 2017

1 reference

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Mechanism of RNA silencing by Hfq-binding small RNAs

19 March 2017

1 reference

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RNA expression analysis using a 30 base pair resolution Escherichia coli genome array

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

The LysR-type virulence activator AphB regulates the expression of genes in Vibrio cholerae in response to low pH and anaerobiosis

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Overlapping binding sites for the virulence gene regulators AphA, AphB and cAMP-CRP at the Vibrio cholerae tcpPH promoter

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

A novel suicide vector and its use in construction of insertion mutations: osmoregulation of outer membrane proteins and virulence determinants in Vibrio cholerae requires toxR

7 April 2017

1 reference

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The Vibrio cholerae virulence regulatory cascade controls glucose uptake through activation of TarA, a small regulatory RNA.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Direct targets of CodY in Staphylococcus aureus.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Computation for ChIP-seq and RNA-seq studies

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Bicarbonate Induces Vibrio cholerae virulence gene expression by enhancing ToxT activity.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Direct regulation by the Vibrio cholerae regulator ToxT to modulate colonization and anticolonization pilus expression

12 September 2017

1 reference

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High-throughput, kingdom-wide prediction and annotation of bacterial non-coding RNAs

12 September 2017

1 reference

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TargetRNA: a tool for predicting targets of small RNA action in bacteria

12 September 2017

1 reference

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Regulation of virulence in Vibrio cholerae: the ToxR regulon

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Regulatory small RNAs circumvent the conventional quorum sensing pathway in pandemic Vibrio cholerae.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Small non-coding RNAs and the bacterial outer membrane

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

In vivo bioluminescence imaging of the murine pathogen Citrobacter rodentium

12 September 2017

1 reference

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CsrA and three redundant small RNAs regulate quorum sensing in Vibrio cholerae.

12 September 2017

1 reference

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The small RNA IstR inhibits synthesis of an SOS-induced toxic peptide

12 September 2017

1 reference

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The Vibrio cholerae ToxR/TcpP/ToxT virulence cascade: distinct roles for two membrane-localized transcriptional activators on a single promoter

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

A Vibrio cholerae LysR homolog, AphB, cooperates with AphA at the tcpPH promoter to activate expression of the ToxR virulence cascade.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Transient transcriptional activation of the Vibrio cholerae El Tor virulence regulator toxT in response to culture conditions

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

New unstable variants of green fluorescent protein for studies of transient gene expression in bacteria

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Use of recombinase gene fusions to identify Vibrio cholerae genes induced during infection

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Transcriptional control of toxT, a regulatory gene in the ToxR regulon of Vibrio cholerae

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

The OmpU outer membrane protein, a potential adherence factor of Vibrio cholerae

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Construction of an eae deletion mutant of enteropathogenic Escherichia coli by using a positive-selection suicide vector

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

The virulence gene activator ToxT from Vibrio cholerae is a member of the AraC family of transcriptional activators

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

New medium for the production of cholera toxin by Vibrio cholerae O1 biotype El Tor.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Widespread antisense transcription in Escherichia coli.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Genes induced late in infection increase fitness of Vibrio cholerae after release into the environment

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Escherichia coli physiology in Luria-Bertani broth

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

TcpF is a soluble colonization factor and protective antigen secreted by El Tor and classical O1 and O139 Vibrio cholerae serogroups

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Hfq is essential for Vibrio cholerae virulence and downregulates sigma expression.

30 May 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002126

The toxbox: specific DNA sequence requirements for activation of Vibrio cholerae virulence genes by ToxT.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002126

Interaction of the RNA chaperone Hfq with mRNAs: direct and indirect roles of Hfq in iron metabolism of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002126

Analysis of ToxR-dependent transcription activation of ompU, the gene encoding a major envelope protein in Vibrio cholerae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002126

Anaerobic growth promotes synthesis of colonization factors encoded at the Vibrio pathogenicity island in Vibrio cholerae El Tor.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002126

Photonic detection of bacterial pathogens in living hosts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002126

Activation of both acfA and acfD transcription by Vibrio cholerae ToxT requires binding to two centrally located DNA sites in an inverted repeat conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1002126

An Address on Cholera and its Bacillus

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3136459

Culture conditions for stimulating cholera toxin production by Vibrio cholerae O1 El Tor

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21779167

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Regulation and temporal expression patterns of Vibrio cholerae virulence genes during infection

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21779167

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Regulation of gene expression in Vibrio cholerae by ToxT involves both antirepression and RNA polymerase stimulation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21779167

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PPAT.1002126

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21779167%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

1 reference