(Q21144970)

4

Sandra M

Adams

1 reference

17 August 2022

Adrián A Pinto-Tomás

6

Adrián A

Pinto-Tomás

1 reference

17 August 2022

Clifton E Foster

7

Clifton E

Foster

1 reference

17 August 2022

Paul J Weimer

9

Paul J

Weimer

1 reference

17 August 2022

Pascal Bouffard

12

Pascal

Bouffard

1 reference

17 August 2022

Lewyn Li

13

Lewyn

Li

1 reference

17 August 2022

Jolene Osterberger

14

Jolene

Osterberger

1 reference

17 August 2022

Timothy T Harkins

15

Timothy T

Harkins

1 reference

17 August 2022

Steven C Slater

16

Steven C

Creative Commons CC0 License

Slater

1 reference

17 August 2022

language of work or name

English

0 references

publication date

September 2010

0 references

published in

PLOS Genetics

0 references

volume

6

0 references

page(s)

e1001129

0 references

issue

9

0 references

copyright license

start time

23 September 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

cites work

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Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

19 March 2017

1 reference

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The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

19 March 2017

1 reference

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The Pfam protein families database

19 March 2017

1 reference

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SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

19 March 2017

1 reference

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Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes

19 March 2017

1 reference

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The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

19 March 2017

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CDD: a conserved domain database for interactive domain family analysis

19 March 2017

1 reference

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Metagenomic analysis of the human distal gut microbiome

19 March 2017

1 reference

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Genome sequencing in microfabricated high-density picolitre reactors

19 March 2017

1 reference

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GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses

19 March 2017

1 reference

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Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.

19 March 2017

1 reference

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Novel division level bacterial diversity in a Yellowstone hot spring

19 March 2017

1 reference

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

19 March 2017

1 reference

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An obesity-associated gut microbiome with increased capacity for energy harvest

19 March 2017

1 reference

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Consed: a graphical tool for sequence finishing

19 March 2017

1 reference

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Base-calling of automated sequencer traces using phred. II. Error probabilities

19 March 2017

1 reference

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Base-calling of automated sequencer traces using phred. I. Accuracy assessment

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

The COG database: a tool for genome-scale analysis of protein functions and evolution

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Bellerophon: a program to detect chimeric sequences in multiple sequence alignments

19 March 2017

1 reference

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Evolution of mammals and their gut microbes

19 March 2017

1 reference

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19 March 2017

1 reference

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

7 April 2017

1 reference

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Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Comparative metagenomics of microbial communities

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

ARB: a software environment for sequence data

7 April 2017

1 reference

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Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite

7 April 2017

1 reference

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UniFrac--an online tool for comparing microbial community diversity in a phylogenetic context

7 April 2017

1 reference

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Quantitative Phylogenetic Assessment of Microbial Communities in Diverse Environments

7 April 2017

1 reference

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Functional metagenomic profiling of nine biomes

10 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Metagenomic profiling of a microbial assemblage associated with the California mussel: a node in networks of carbon and nitrogen cycling

10 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Symbiotic nitrogen fixation in the fungus gardens of leaf-cutter ants

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Bacterial gut symbionts are tightly linked with the evolution of herbivory in ants

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Lessons from the cow: what the ruminant animal can teach us about consolidated bioprocessing of cellulosic biomass

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

DNAPlotter: circular and linear interactive genome visualization

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Plant genetic engineering for biofuel production: towards affordable cellulosic ethanol

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Towards a molecular understanding of symbiont function: identification of a fungal gene for the degradation of xylan in the fungus gardens of leaf-cutting ants

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Diversity and activity of cellulose-decomposing bacteria, isolated from a sandy and a loamy soil after long-term manure application

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Symbiosis insights through metagenomic analysis of a microbial consortium

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Seasonal changes in an alpine soil bacterial community in the colorado rocky mountains

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Census of the bacterial community of the gypsy moth larval midgut by using culturing and culture-independent methods

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

The gut bacteria of insects: nonpathogenic interactions

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Phylogenetic structure of unusual aquatic microbial formations in Nullarbor caves, Australia

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Effective recovery of bacterial DNA and percent-guanine-plus-cytosine-based analysis of community structure in the gastrointestinal tract of broiler chickens

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Semimicro determination of cellulose inbiological materials

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Weeding and grooming of pathogens in agriculture by ants.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944797

Hydrolytic enzymes of leaf-cutting ant fungi

30 May 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001129

A molecular approach to search for diversity among bacteria in the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001129

Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001129

Effect of monensin feeding and withdrawal on populations of individual bacterial species in the rumen of lactating dairy cows fed high-starch rations

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001129

Clearcut: a fast implementation of relaxed neighbor joining.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001129

Accuracy of Klason lignin and acid detergent lignin methods as assessed by bomb calorimetry

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20885794

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Isolation and analysis of cell walls from plant material

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20885794

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.1001129

1 reference

166840

166840

1 reference

1 reference

1 reference