(Q21145006)

English

The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats

scientific article

The Complete Genome and Proteome of Laribacter hongkongensis Reveal Potential Mechanisms for Adaptations to Different Temperatures and Habitats

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19283063%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19283063%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

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whole genome sequencing

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Nicholas J. Loman

10

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Nicholas J Loman

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Nicholas J

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Loman

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23 January 2020

11

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Lori A S Snyder

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Lori A S

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23 January 2020

12

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James J Cai

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James J

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23 January 2020

15

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Mark J Pallen

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23 January 2020

17

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Kwok-Yung Yuen

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Kwok-Yung

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Yuen

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23 January 2020

Patrick C Y Woo

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Patrick C Y Woo

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23 January 2020

Susanna Kar-Pui Lau

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23 January 2020

4

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Jade L L

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Teng

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Jade L L Teng

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23 January 2020

Shirly O T Curreem

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Curreem

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23 January 2020

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Herman Tse

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23 January 2020

Alan K L Tsang

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23 January 2020

Rachel Y Y Fan

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23 January 2020

Gilman K M Wong

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Wong

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23 January 2020

Yi Huang

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23 January 2020

Jian-Dong Huang

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Huang

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23 January 2020

William Mak

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William

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23 January 2020

Si Lok

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Si

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Lok

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23 January 2020

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13 March 2009

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23 January 2020

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Europe PubMed Central

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23 January 2020

5

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Europe PubMed Central

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23 January 2020

3

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Europe PubMed Central

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23 January 2020

e1000416

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19283063%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

copyright license

Creative Commons Attribution 4.0 International

13 March 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

Identifying bacterial genes and endosymbiont DNA with Glimmer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

TCDB: the Transporter Classification Database for membrane transport protein analyses and information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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InterProScan: protein domains identifier

1 reference

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AutoFACT: an automatic functional annotation and classification tool

1 reference

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19 March 2017

Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability

1 reference

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19 March 2017

Multidrug efflux pumps of gram-negative bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

Biosynthesis and metabolism of arginine in bacteria

1 reference

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19 March 2017

The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

PILER-CR: fast and accurate identification of CRISPR repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

HDEA, a periplasmic protein that supports acid resistance in pathogenic enteric bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

19 March 2017

Development of a multi-locus sequence typing scheme for Laribacter hongkongensis, a novel bacterium associated with freshwater fish-borne gastroenteritis and traveler's diarrhea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Complete genome sequence of Neisseria gonorrhoeae NCCP11945.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

12 September 2017

Distribution and molecular characterization of tetracycline resistance in Laribacter hongkongensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

12 September 2017

CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

12 September 2017

Laribacter hongkongensis isolated from a patient with community-acquired gastroenteritis in Hangzhou City

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

12 September 2017

Current status and future directions for Laribacter hongkongensis, a novel bacterium associated with gastroenteritis and traveller's diarrhoea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

12 September 2017

Cloning and characterization of a chromosomal class C beta-lactamase and its regulatory gene in Laribacter hongkongensis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

12 September 2017

Ecoepidemiology of Laribacter hongkongensis, a novel bacterium associated with gastroenteritis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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BACCardI--a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Escherichia coli acid resistance: tales of an amateur acidophile

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Association of Laribacter hongkongensis in community-acquired gastroenteritis with travel and eating fish: a multicentre case-control study.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Patatin-like proteins: a new family of lipolytic enzymes present in bacteria?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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N-acetylglutamate and its changing role through evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

12 September 2017

Laribacter hongkongensis gen. nov., sp. nov., a novel gram-negative bacterium isolated from a cirrhotic patient with bacteremia and empyema

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

12 September 2017

Enterotoxigenic Escherichia coli TibA glycoprotein adheres to human intestine epithelial cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Quorum sensing controls expression of the type III secretion gene transcription and protein secretion in enterohemorrhagic and enteropathogenic Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Detecting and analyzing DNA sequencing errors: toward a higher quality of the Bacillus subtilis genome sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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The interaction between RTX toxins and target cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Arginine deiminase system and bacterial adaptation to acid environments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Isolation and serologic characterization of AIDA-I, the adhesin mediating the diffuse adherence phenotype of the diarrhea-associated Escherichia coli strain 2787 (O126:H27)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Arginine biosynthesis in Thermotoga maritima: characterization of the arginine-sensitive N-acetyl-L-glutamate kinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

27 September 2017

Use of cefoperazone MacConkey agar for selective isolation of Laribacter hongkongensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

27 September 2017

GenDB--an open source genome annotation system for prokaryote genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

27 September 2017

Salmonella enterica serovar typhimurium resistance to bile: identification and characterization of the tolQRA cluster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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Active efflux of bile salts by Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

27 September 2017

Plasmid profile and construction of a small shuttle vector in Laribacter hongkongensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

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AI-3 synthesis is not dependent on luxS in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652115

30 May 2018

Laribacter hongkongensis: a potential cause of infectious diarrhea

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000416

21 January 2018

Seasonal and tissue distribution of Laribacter hongkongensis, a novel bacterium associated with gastroenteritis, in retail freshwater fish in Hong Kong.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000416

21 January 2018

Isolation of Laribacter hongkongensis, a novel bacterium associated with gastroenteritis, from drinking water reservoirs in Hong Kong.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000416

21 January 2018

Construction of an inducible expression shuttle vector for Laribacter hongkongensis, a novel bacterium associated with gastroenteritis.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000416

21 January 2018

Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000416

21 January 2018

Structure, regulation, and putative function of the arginine deiminase system of Streptococcus suis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000416

21 January 2018

TICO: a tool for improving predictions of prokaryotic translation initiation sites.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000416

21 January 2018

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1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000416

21 January 2018

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1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000416

21 January 2018

N-acetylglutamate 5-phosphotransferase of Pseudomonas aeruginosa. Catalytic and regulatory properties

1 reference

https://pubmed.ncbi.nlm.nih.gov/19283063

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Prophage Finder: a prophage loci prediction tool for prokaryotic genome sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/19283063

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PGEN.1000416

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19283063%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Europe PubMed Central

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23 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

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23 January 2020

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