(Q21284206)

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Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data

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Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data (English)

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Stian Soiland-Reyes

5

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Stian Soiland-Reyes

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Stian

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Soiland-Reyes

1 reference

Dimensions Publication ID

19 August 2022

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Stuart Owen

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Stuart

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Owen

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19 August 2022

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Peter Li

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Peter

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Li

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19 August 2022

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Carole A Goble

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Carole A

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Goble

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19 August 2022

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Douglas B Kell

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Douglas B

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Kell

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19 August 2022

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Tom Oinn

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Tom

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Oinn

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19 August 2022

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Juan I Castrillo

2

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Juan I

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Castrillo

1 reference

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19 August 2022

Giles Velarde

3

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Giles

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Velarde

1 reference

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19 August 2022

Ingo Wassink

4

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Ingo

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Wassink

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19 August 2022

David Withers

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David

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Withers

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19 August 2022

Matthew R Pocock

9

author given names

Matthew R

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Pocock

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19 August 2022

Stephen G Oliver

11

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Stephen G

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Oliver

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19 August 2022

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publication date

2008

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BMC Bioinformatics

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9

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334

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1

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copyright license

Creative Commons Attribution 2.0 Generic

7 August 2008

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April 2022 Public Data File from Crossref

copyright status

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April 2022 Public Data File from Crossref

https://scigraph.springernature.com/pub.10.1186/1471-2105-9-334

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maxdLoad2 and maxdBrowse: standards-compliant tools for microarray experimental annotation, data management and dissemination

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

19 March 2017

Gene ontology: tool for the unification of biology

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19 March 2017

Growth control of the eukaryote cell: a systems biology study in yeast

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19 March 2017

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

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19 March 2017

A systematic strategy for large-scale analysis of genotype phenotype correlations: identification of candidate genes involved in African trypanosomiasis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

19 March 2017

BioMoby extensions to the Taverna workflow management and enactment software

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

19 March 2017

Taverna: a tool for building and running workflows of services

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

19 March 2017

Taverna: a tool for the composition and enactment of bioinformatics workflows

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

19 March 2017

Here is the evidence, now what is the hypothesis? The complementary roles of inductive and hypothesis-driven science in the post-genomic era

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

7 April 2017

GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

7 April 2017

State of the nation in data integration for bioinformatics

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

12 September 2017

Multiple high-throughput analyses monitor the response of E. coli to perturbations

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12 September 2017

BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

12 September 2017

GenePublisher: Automated analysis of DNA microarray data

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

12 September 2017

oneChannelGUI: a graphical interface to Bioconductor tools, designed for life scientists who are not familiar with R language.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2528018

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Scientific workflow management and the Kepler system

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-9-334

7 January 2021

based on heuristic

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Pegasus: A Framework for Mapping Complex Scientific Workflows onto Distributed Systems

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https://api.crossref.org/works/10.1186%2F1471-2105-9-334

7 January 2021

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Identifiers

10.1186/1471-2105-9-334

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journals/bmcbi/LiCVWSOWOPGOK08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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