(Q21560883)

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Improved resolution of reef-coral endosymbiont (Symbiodinium) species diversity, ecology, and evolution through psbA non-coding region genotyping

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Improved resolution of reef-coral endosymbiont (Symbiodinium) species diversity, ecology, and evolution through psbA non-coding region genotyping (English)

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Todd C. LaJeunesse

object named as

Todd C LaJeunesse

1

author given names

Todd C

author last names

LaJeunesse

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PubMed publication ID

30 August 2022

author name string

Daniel J Thornhill

2

author given names

Daniel J

author last names

Thornhill

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PubMed publication ID

30 August 2022

language of work or name

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publication date

2011

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6

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12

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e29013

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Creative Commons Attribution 4.0 International

28 December 2011

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April 2022 Public Data File from Crossref

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maintained by WikiProject

WikiProject Ecology

1 reference

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inferred from title

MRBAYES: Bayesian inference of phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

19 March 2017

Genotypic diversity and spatial-temporal distribution of Symbiodinium clones in an abundant reef coral

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19 March 2017

The relative significance of host-habitat, depth, and geography on the ecology, endemism, and speciation of coral endosymbionts in the genus Symbiodinium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

19 March 2017

Outbreak and persistence of opportunistic symbiotic dinoflagellates during the 2005 Caribbean mass coral 'bleaching' event

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19 March 2017

Cohesive molecular genetic data delineate species diversity in the dinoflagellate genus Symbiodinium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

19 March 2017

Bleaching susceptibility and mortality of corals are determined by fine-scale differences in symbiont type

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

19 March 2017

Species concepts and species delimitation

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19 March 2017

Measuring rDNA diversity in eukaryotic microbial systems: how intragenomic variation, pseudogenes, and PCR artifacts confound biodiversity estimates

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19 March 2017

Progress towards DNA barcoding of fungi

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Variation in Symbiodinium ITS2 sequence assemblages among coral colonies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Species delimitation of common reef corals in the genus Pocillopora using nucleotide sequence phylogenies, population genetics and symbiosis ecology.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Reef endemism, host specificity and temporal stability in populations of symbiotic dinoflagellates from two ecologically dominant Caribbean corals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Is there a molecular key to the level of "biological species" in eukaryotes? A DNA guide

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

The remarkable chloroplast genome of dinoflagellates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Recognizing diversity in coral symbiotic dinoflagellate communities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Molecular phylogeny, evolutionary rates, and divergence timing of the symbiotic dinoflagellate genus Symbiodinium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

"Species" radiations of symbiotic dinoflagellates in the Atlantic and Indo-Pacific since the Miocene-Pliocene transition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Dinoflagellate expressed sequence tag data indicate massive transfer of chloroplast genes to the nuclear genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Geographic and habitat partitioning of genetically distinct zooxanthellae (Symbiodinium) in Acropora corals on the Great Barrier Reef.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Phylogenetics and the origin of species

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Intraspecific diversity and ecological zonation in coral-algal symbiosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Molecular drive: a cohesive mode of species evolution

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Ribosomal DNA: Molecular Evolution and Phylogenetic Inference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

12 September 2017

Long transcripts from dinoflagellate chloroplast minicircles suggest "rolling circle" transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3247227

30 May 2018

INVESTIGATING THE BIODIVERSITY, ECOLOGY, AND PHYLOGENY OF ENDOSYMBIOTIC DINOFLAGELLATES IN THE GENUS SYMBIODINIUM USING THE ITS REGION: IN SEARCH OF A "SPECIES" LEVEL MARKER

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Flexibility and specificity in coral-algal symbiosis: diversity, ecology, and biogeography of Symbiodinium

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Diversity and community structure of symbiotic dinoflagellates from Caribbean coral reefs

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Niche partitioning of closely related symbiotic dinoflagellates.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Long-standing environmental conditions, geographic isolation and host-symbiont specificity influence the relative ecological dominance and genetic diversification of coral endosymbionts in the genusSymbiodinium

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

RECOGNIZING DINOFLAGELLATE SPECIES USING ITS rDNA SEQUENCES

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Evolution of dinoflagellate unigenic minicircles and the partially concerted divergence of their putative replicon origins

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Highly organized structure in the non-coding region of the psbA minicircle from clade C Symbiodinium

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Double hairpin elements and tandem repeats in the non-coding region of Adenoides eludens chloroplast gene minicircles

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Molecular diversity of dinoflagellate symbionts of Cnidaria: the psbA minicircle of Symbiodinium

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Multi-year, seasonal genotypic surveys of coral-algal symbioses reveal prevalent stability or post-bleaching reversion

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

SYMBIODINIUM (DINOPHYTA) DIVERSITY AND STABILITY IN AQUARIUM CORALS(1).

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Migration of the plastid genome to the nucleus in a peridinin dinoflagellate.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

The copy number of chloroplast gene minicircles changes dramatically with growth phase in the dinoflagellate Amphidinium operculatum

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Microsatellite loci for assessing genetic diversity, dispersal and clonality of coral symbionts in 'stress-tolerant' clade D Symbiodinium.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Preservation of avian blood and tissue samples for DNA analyses

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Fluctuating algal symbiont communities in Acropora palifera (Scleractinia: Acroporidae) from Taiwan

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

21 January 2018

Patterns of coral-dinoflagellate associations in Acropora: significance of local availability and physiology of Symbiodinium strains and host-symbiont selectivity

1 reference

https://pubmed.ncbi.nlm.nih.gov/22216157

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A molecular genetic classification of zooxanthellae and the evolution of animal-algal symbioses

1 reference

https://pubmed.ncbi.nlm.nih.gov/22216157

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Screening intragenomic rDNA for dominant variants can provide a consistent retrieval of evolutionarily persistent ITS (rDNA) sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/22216157

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic diversity of symbiotic dinoflagellates in the genus Symbiodinium

1 reference

https://pubmed.ncbi.nlm.nih.gov/22216157

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microsatellite loci for Symbiodinium A3 (S. fitti) a common algal symbiont among Caribbean Acropora (stony corals) and Indo-Pacific giant clams (Tridacna)

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0029013

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1371/JOURNAL.PONE.0029013

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2011PLoSO...629013L

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OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PubMed publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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