(Q21562664)

22 June 2017

title

Spatial structure and activity of sedimentary microbial communities underlying a Beggiatoa spp. mat in a Gulf of Mexico hydrocarbon seep (English)

1 reference

22 June 2017

0 references

Karen G Lloyd

1

Karen G

Lloyd

1 reference

PubMed

29 August 2022

Jennifer F Biddle

3

Jennifer F

Biddle

1 reference

PubMed

29 August 2022

6

Andreas

Teske

Andreas Teske

1 reference

22 June 2017

Daniel B Albert

2

Daniel B

Albert

1 reference

22 June 2017

Jeffrey P Chanton

series ordinal

4

author given names

Jeffrey P

author last names

Chanton

1 reference

22 June 2017

Oscar Pizarro

series ordinal

5

author given names

Oscar

author last names

Pizarro

1 reference

22 June 2017

language of work or name

English

0 references

publication date

15 January 2010

1 reference

22 June 2017

1 reference

22 June 2017

volume

5

1 reference

22 June 2017

issue

1

1 reference

22 June 2017

page(s)

e8738

1 reference

Creative Commons Attribution 4.0 International

22 June 2017

copyright license

start time

15 January 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Diversity of Archaea in marine sediments from Skan Bay, Alaska, including cultivated methanogens, and description of Methanogenium boonei sp. nov

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19 March 2017

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The Uncultured Microbial Majority

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Isolation of an autotrophic ammonia-oxidizing marine archaeon

19 March 2017

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Partial gene sequences for the A subunit of methyl-coenzyme M reductase (mcrI) as a phylogenetic tool for the family Methanosarcinaceae

19 March 2017

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Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru

19 March 2017

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Characterization of microbial community structure in Gulf of Mexico gas hydrates: comparative analysis of DNA- and RNA-derived clone libraries.

19 March 2017

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Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness

19 March 2017

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7 April 2017

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RNA degradation in Archaea and Gram-negative bacteria different from Escherichia coli

7 April 2017

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Variations in archaeal and bacterial diversity associated with the sulfate-methane transition zone in continental margin sediments (Santa Barbara Basin, California).

12 September 2017

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Prokaryotic biodiversity and activity in the deep subseafloor biosphere

12 September 2017

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The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity

12 September 2017

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Active bacterial community structure along vertical redox gradients in Baltic Sea sediment.

12 September 2017

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Uncultured archaea in deep marine subsurface sediments: have we caught them all?

12 September 2017

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Microbial population structures in the deep marine biosphere

12 September 2017

1 reference

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Adaptations to energy stress dictate the ecology and evolution of the Archaea

12 September 2017

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Diversity and abundance of sulfate-reducing microorganisms in the sulfate and methane zones of a marine sediment, Black Sea.

12 September 2017

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An anaerobic methane-oxidizing community of ANME-1b archaea in hypersaline Gulf of Mexico sediments

12 September 2017

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Microbial community in a sediment-hosted CO2 lake of the southern Okinawa Trough hydrothermal system

12 September 2017

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Climatically driven emissions of hydrocarbons from marine sediments during deglaciation

12 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Stratified communities of active Archaea in deep marine subsurface sediments

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Competition and coexistence of sulfate-reducing and methanogenic populations in anaerobic biofilms

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Simultaneous rates of ribonucleic Acid and deoxyribonucleic Acid syntheses for estimating growth and cell division of aquatic microbial communities.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Methyl-coenzyme M reductase genes: unique functional markers for methanogenic and anaerobic methane-oxidizing Archaea

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Methanol-dependent gene expression demonstrates that methyl-coenzyme M reductase is essential in Methanosarcina acetivorans C2A and allows isolation of mutants with defects in regulation of the methanol utilization pathway.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Lipid biomarkers and carbon isotope signatures of a microbial (Beggiatoa) mat associated with gas hydrates in the gulf of Mexico

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Characterization of C1-metabolizing prokaryotic communities in methane seep habitats at the Kuroshima Knoll, southern Ryukyu Arc, by analyzing pmoA, mmoX, mxaF, mcrA, and 16S rRNA genes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Identification of members of the metabolically active microbial populations associated with Beggiatoa species mat communities from Gulf of Mexico cold-seep sediments

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Identification of methyl coenzyme M reductase A (mcrA) genes associated with methane-oxidizing archaea

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Archaeal diversity associated with in situ samplers deployed on hydrothermal vents on the East Pacific Rise (13 degrees N).

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Molecular Characterization of Sulfate-Reducing Bacteria in the Guaymas Basin

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Comparative analysis of methane-oxidizing archaea and sulfate-reducing bacteria in anoxic marine sediments.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Biogeochemical and molecular signatures of anaerobic methane oxidation in a marine sediment

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Archaeal dominance in the mesopelagic zone of the Pacific Ocean

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

A few cosmopolitan phylotypes dominate planktonic archaeal assemblages in widely different oceanic provinces

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Genetic diversity of archaea in deep-sea hydrothermal vent environments

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Nucleic acid (DNA, RNA) quantification and RNA/DNA ratio determination in marine sediments: comparison of spectrophotometric, fluorometric, and HighPerformance liquid chromatography methods and estimation of detrital DNA

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Phylogeny of dissimilatory sulfite reductases supports an early origin of sulfate respiration

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Crenarchaeota in Lake Michigan sediment

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Isolation and identification of methanogen-specific DNA from blanket bog peat by PCR amplification and sequence analysis.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Regulation of the synthesis of ribosomes and ribosomal components

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

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1 reference

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Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Mechanism and regulation of bacterial ribosomal RNA processing

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Distribution of sulfate-reducing bacteria in a stratified fjord (Mariager Fjord, Denmark) as evaluated by most-probable-number counts and denaturing gradient gel electrophoresis of PCR-amplified ribosomal DNA fragments

12 September 2017

1 reference

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Direct ribosome isolation from soil to extract bacterial rRNA for community analysis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol

27 September 2017

1 reference

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mRNAs in the methanogenic archaeon Methanococcus vannielii: numbers, half-lives and processing.

30 May 2018

1 reference

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30 May 2018

1 reference

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29 November 2018

1 reference

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Quantifying expression of a dissimilatory (bi)sulfite reductase gene in petroleum-contaminated marine harbor sediments

29 November 2018

1 reference

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Phylogenetic diversity and distribution of dissimilatory sulfite reductase genes from deep-sea sediment cores

29 November 2018

1 reference

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Functional marker genes for identification of sulfate-reducing prokaryotes

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

Quantification of dissimilatory (bi)sulphite reductase gene expression in Desulfobacterium autotrophicum using real-time RT-PCR.

29 November 2018

1 reference

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High-precision continuous-flow measurement of delta13C and deltaD of atmospheric CH4.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2806916

A marine microbial consortium apparently mediating anaerobic oxidation of methane

29 November 2018

1 reference

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10.1371/JOURNAL.PONE.0008738

29 November 2018

Identifiers

DOI

1 reference

OpenCitations bibliographic resource ID

22 June 2017

0 references

432226

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

432226

1 reference