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LUMPY: a probabilistic framework for structural variant discovery.
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
title
LUMPY: a probabilistic framework for structural variant discovery
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
author
Colby Chiang
series ordinal
2
object named as
Colby Chiang
author given names
Colby
author last names
Chiang
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
Aaron R Quinlan
series ordinal
3
object named as
Aaron R Quinlan
author given names
Aaron R
author last names
Quinlan
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
author name string
Ryan M Layer
series ordinal
1
author given names
Ryan M
author last names
Layer
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
Ira M Hall
series ordinal
4
author given names
Ira M
author last names
Hall
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
language of work or name
English
0 references
publication date
26 June 2014
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
published in
Genome Biology
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
volume
15
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
issue
6
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
page(s)
R84
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
cites work
DELLY: structural variant discovery by integrated paired-end and split-read analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
19 March 2017
Mapping copy number variation by population-scale genome sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
19 March 2017
Fast and accurate short read alignment with Burrows-Wheeler transform
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
19 March 2017
The Sequence Alignment/Map format and SAMtools
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
19 March 2017
CNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
19 March 2017
A framework for variation discovery and genotyping using next-generation DNA sequencing data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
7 April 2017
BEDTools: a flexible suite of utilities for comparing genomic features
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
7 April 2017
Fast and accurate long-read alignment with Burrows-Wheeler transform
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
7 April 2017
Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
7 April 2017
YAHA: fast and flexible long-read alignment with optimal breakpoint detection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
12 September 2017
An integrative probabilistic model for identification of structural variation in sequencing data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
12 September 2017
Simultaneous structural variation discovery among multiple paired-end sequenced genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
12 September 2017
CREST maps somatic structural variation in cancer genomes with base-pair resolution.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
12 September 2017
Genome structural variation discovery and genotyping
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
12 September 2017
Discovery and genotyping of genome structural polymorphism by sequencing on a population scale
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
12 September 2017
Genome-wide mapping and assembly of structural variant breakpoints in the mouse genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
12 September 2017
Computational methods for discovering structural variation with next-generation sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
12 September 2017
BreakDancer: an algorithm for high-resolution mapping of genomic structural variation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
12 September 2017
Detecting copy number variation with mated short reads
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4197822
retrieved
30 May 2018
Identifiers
DOI
10.1186/GB-2014-15-6-R84
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
arXiv ID
1210.2342
1 reference
stated in
Unpaywall
OpenCitations bibliographic resource ID
349156
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
349156
PMC publication ID
4197822
2 references
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
349156
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
PubMed publication ID
24970577
1 reference
stated in
Europe PubMed Central
PMC publication ID
4197822
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24970577%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 March 2020
ResearchGate publication ID
232063328
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