(Q22066013)

English

Chloroplast Genome (cpDNA) of Cycas taitungensis and 56 cp Protein-Coding Genes of Gnetum parvifolium: Insights into cpDNA Evolution and Phylogeny of Extant Seed Plants

scientific article

Chloroplast genome (cpDNA) of Cycas taitungensis and 56 cp protein-coding genes of Gnetum parvifolium: insights into cpDNA evolution and phylogeny of extant seed plants

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scholarly article

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Chloroplast Genome (cpDNA) of Cycas taitungensis and 56 cp Protein-Coding Genes of Gnetum parvifolium: Insights into cpDNA Evolution and Phylogeny of Extant Seed Plants (English)

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protein evolution

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1 reference

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inferred from title

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Gnetum parvifolium

object named as

Gnetum parvifolium

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based on heuristic

inferred from title

Cycas taitungensis

object named as

Cycas taitungensis

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author name string

C.-S. Wu

1

author given names

Chung-Shien

author last names

Wu

1 reference

7 February 2023

Y.-N. Wang

2

author given names

Ya-Nan

author last names

Wang

1 reference

7 February 2023

S.-M. Liu

3

author given names

Shu-Mei

author last names

Liu

1 reference

7 February 2023

S.-M. Chaw

4

author given names

Shu-Miaw

author last names

Chaw

1 reference

7 February 2023

language of work or name

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publication date

10 March 2007

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Molecular Biology and Evolution

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24

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6

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1366-1379

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Evidence for a clade of nematodes, arthropods and other moulting animals

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Functional Constraints and rbcL Evidence for Land Plant Phylogeny

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Evolutionary transfer of the chloroplast tufA gene to the nucleus.

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A review of long-branch attraction

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Phylogeny of seed plants based on all three genomic compartments: extant gymnosperms are monophyletic and Gnetales' closest relatives are conifers

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Cycads: evolutionary innovations and the role of plant-derived neurotoxins

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Phylogenetic signal in nucleotide data from seed plants: implications for resolving the seed plant tree of life

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Seed plant phylogeny inferred from all three plant genomes: monophyly of extant gymnosperms and origin of Gnetales from conifers

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Molecular phylogeny of extant gymnosperms and seed plant evolution: analysis of nuclear 18S rRNA sequences

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The Arabidopsis chloroplast ribosomal protein L21 is encoded by a nuclear gene of mitochondrial origin.

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Noncoding sequences from the slowly evolving chloroplast inverted repeat in addition to rbcL data do not support gnetalean affinities of angiosperms

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Is it better to add taxa or characters to a difficult phylogenetic problem?

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Seed plant phylogeny: gnetophytes are derived conifers and a sister group to Pinaceae

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A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

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MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

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Relationships among seed plants inferred from highly conserved genes: sorting conflicting phylogenetic signals among ancient lineages

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Complete sequence of the maize chloroplast genome: gene content, hotspots of divergence and fine tuning of genetic information by transcript editing

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Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus

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Gene transfer to the nucleus and the evolution of chloroplasts

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Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants

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Evolutionary re-organisation of a large operon in adzuki bean chloroplast DNA caused by inverted repeat movement.

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MODELTEST: testing the model of DNA substitution

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Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants.

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Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference

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Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants

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MrBayes 3: Bayesian phylogenetic inference under mixed models

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Seed Plant Relationships and the Systematic Position of Gnetales Based on Nuclear and Chloroplast DNA: Conflicting Data, Rooting Problems, and the Monophyly of Conifers

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Error, bias, and long-branch attraction in data for two chloroplast photosystem genes in seed plants

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The evolution of gymnosperms redrawn by phytochrome genes: the Gnetatae appear at the base of the gymnosperms

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Ferns diversified in the shadow of angiosperms

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Structural rearrangements of the chloroplast genome provide an important phylogenetic link in ferns

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Chloroplast genomes of two conifers lack a large inverted repeat and are extensively rearranged

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Structure and differential expression of two distinct genes encoding the chloroplast elongation factor Tu in tobacco

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The chloroplast and mitochondrial genome sequences of the charophyte Chaetosphaeridium globosum: insights into the timing of the events that restructured organelle DNAs within the green algal lineage that led to land plants

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The complete mitochondrial DNA sequence of Mesostigma viride identifies this green alga as the earliest green plant divergence and predicts a highly compact mitochondrial genome in the ancestor of all green plants

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The chloroplast genome sequence of Chara vulgaris sheds new light into the closest green algal relatives of land plants

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Creation of a novel protein-coding region at the RNA level in black pine chloroplasts: the pattern of RNA editing in the gymnosperm chloroplast is different from that in angiosperms

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Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii

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A new Permian gnetalean cone as fossil evidence for supporting current molecular phylogeny

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Dating dispersal and radiation in the gymnosperm Gnetum (Gnetales)--clock calibration when outgroup relationships are uncertain

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Automatic annotation of organellar genomes with DOGMA

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RNA editing in bryophytes and a molecular phylogeny of land plants

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Chloroplast DNA of black pine retains a residual inverted repeat lacking rRNA genes: nucleotide sequences of trnQ, trnK, psbA, trnI and trnH and the absence of rps16

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Taxonomic sampling, phylogenetic accuracy, and investigator bias

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The evolution of chloroplast RNA editing

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