(Q22066058)

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Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis

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scholarly article

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Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis (English)

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Porphyromonas gingivalis

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Porphyromonas gingivalis W83

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Masahira Hattori

11

object named as

Masahira Hattori

author given names

Masahira

author last names

Hattori

1 reference

7 February 2023

1

object named as

Mariko Naito

author given names

Mariko

author last names

Naito

1 reference

7 February 2023

8

object named as

Hidehiro Toh

author given names

Hidehiro

author last names

Toh

1 reference

7 February 2023

author name string

Hideki Hirakawa

2

author given names

Hideki

author last names

Hirakawa

1 reference

7 February 2023

Atsushi Yamashita

3

author given names

Atsushi

author last names

Yamashita

1 reference

7 February 2023

Naoya Ohara

4

author given names

Naoya

author last names

Ohara

1 reference

7 February 2023

Mikio Shoji

5

author given names

Mikio

author last names

Shoji

1 reference

7 February 2023

Hideharu Yukitake

6

author given names

Hideharu

author last names

Yukitake

1 reference

7 February 2023

Keisuke Nakayama

7

author given names

Keisuke

author last names

Nakayama

1 reference

7 February 2023

Fuminobu Yoshimura

9

author given names

Fuminobu

author last names

Yoshimura

1 reference

7 February 2023

Satoru Kuhara

10

author given names

Satoru

author last names

Kuhara

1 reference

7 February 2023

Tetsuya Hayashi

12

author given names

Tetsuya

author last names

Hayashi

1 reference

7 February 2023

Koji Nakayama

13

author given names

Koji

author last names

Nakayama

1 reference

7 February 2023

language of work or name

0 references

publication date

August 2008

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15

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215-25

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4

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Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation

1 reference

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19 March 2017

Complete genome sequence of the oral pathogenic Bacterium porphyromonas gingivalis strain W83

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

19 March 2017

Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T

1 reference

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6 April 2017

Automated finishing with autofinish

1 reference

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19 March 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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19 March 2017

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

1 reference

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19 March 2017

Extensive DNA Inversions in the B. fragilis Genome Control Variable Gene Expression

1 reference

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19 March 2017

A new mathematical model for relative quantification in real-time RT-PCR

1 reference

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19 March 2017

Base-calling of automated sequencer traces using phred. II. Error probabilities

1 reference

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19 March 2017

PipMaker--a web server for aligning two genomic DNA sequences

1 reference

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19 March 2017

Fast algorithms for large-scale genome alignment and comparison

1 reference

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7 April 2017

CRITICA: coding region identification tool invoking comparative analysis

1 reference

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7 April 2017

Disruption of epithelial barrier and impairment of cellular function by Porphyromonas gingivalis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

12 September 2017

Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a.

1 reference

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12 September 2017

Role of oxyR in the oral anaerobe Porphyromonas gingivalis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

12 September 2017

Identification and characterization of the capsular polysaccharide (K-antigen) locus of Porphyromonas gingivalis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

12 September 2017

Genetic and structural analysis of the Bacteroides conjugative transposon CTn341.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

12 September 2017

Epidemiology of periodontal disease: a review and clinical perspectives

1 reference

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12 September 2017

Epidemiology of periodontal diseases: an update.

1 reference

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12 September 2017

Plant transposable elements: where genetics meets genomics

1 reference

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12 September 2017

Porphyromonas gingivalis proteinases as virulence determinants in progression of periodontal diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

12 September 2017

Multiple infections in carotid atherosclerotic plaques

1 reference

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12 September 2017

Virulence factors of Porphyromonas gingivalis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

12 September 2017

Genomic loci of the Porphyromonas gingivalis insertion element IS1126.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

12 September 2017

Life below the gum line: pathogenic mechanisms of Porphyromonas gingivalis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

12 September 2017

Combining diverse evidence for gene recognition in completely sequenced bacterial genomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

12 September 2017

Periodontal diseases in the United States population

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12 September 2017

Biology of asaccharolytic black-pigmented Bacteroides species

1 reference

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12 September 2017

Modeling and predicting transcriptional units of Escherichia coli genes using hidden Markov models

1 reference

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27 September 2017

Isolation and characterization of transposon-induced mutants of Porphyromonas gingivalis deficient in fimbriation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

27 September 2017

Rapid viability loss on exposure to air in a superoxide dismutase-deficient mutant of Porphyromonas gingivalis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

27 September 2017

Periodontal disease and cardiovascular disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

27 September 2017

Periodontal diseases: diagnosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

27 September 2017

Sequence diversity and antigenic variation at the rag locus of Porphyromonas gingivalis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

30 May 2018

Transfer region of a bacteroides conjugative transposon, CTnDOT.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

30 May 2018

Molecular cloning and sequencing of the fimbrilin gene of Porphyromonas gingivalis strains and characterization of recombinant proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2575886

30 May 2018

Human Atherosclerotic Plaque Contains Viable Invasive Actinobacillus actinomycetemcomitans and Porphyromonas gingivalis

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSN013

21 January 2018

Construction and characterization of arginine-specific cysteine proteinase (Arg-gingipain)-deficient mutants of Porphyromonas gingivalis. Evidence for significant contribution of Arg-gingipain to virulence.

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSN013

21 January 2018

Involvement of a lysine-specific cysteine proteinase in hemoglobin adsorption and heme accumulation by Porphyromonas gingivalis.

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSN013

21 January 2018

Porphyromonas gingivalis-induced platelet aggregation in plasma depends on Hgp44 adhesin but not Rgp proteinase

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSN013

21 January 2018

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSN013

21 January 2018

An automated system for genome analysis to support microbial whole-genome shotgun sequencing

1 reference

https://api.crossref.org/works/10.1093%2FDNARES%2FDSN013

21 January 2018

Periodontal disease and risk of fatal coronary heart and cerebrovascular diseases

1 reference

https://pubmed.ncbi.nlm.nih.gov/18524787

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of biologically active cell surface components of a periodontal pathogen. The roles of major and minor fimbriae of Porphyromonas gingivalis

1 reference

https://pubmed.ncbi.nlm.nih.gov/18524787

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dental infection and the risk of new coronary events: prospective study of patients with documented coronary artery disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/18524787

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Poor Oral Health and Coronary Heart Disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/18524787

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic analyses of proteolysis, hemoglobin binding, and hemagglutination of Porphyromonas gingivalis. Construction of mutants with a combination of rgpA, rgpB, kgp, and hagA

1 reference

https://pubmed.ncbi.nlm.nih.gov/18524787

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/DNARES/DSN013

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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