(Q24293625)

English

Structural basis for mRNA Cap-Binding regulation of eukaryotic initiation factor 4E by 4E-binding protein, studied by spectroscopic, X-ray crystal structural, and molecular dynamics simulation methods

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scholarly article

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Structural basis for mRNA Cap-Binding regulation of eukaryotic initiation factor 4E by 4E-binding protein, studied by spectroscopic, X-ray crystal structural, and molecular dynamics simulation methods (English)

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molecular dynamics simulation

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X-ray crystallography

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Eukaryotic translation initiation factor 4E

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GOA release 2020-03-11

author name string

Koji Tomoo

1

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Yasunori Matsushita

2

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Hiroyuki Fujisaki

3

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Fumi Abiko

4

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Xu Shen

5

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Taizo Taniguchi

6

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Hiroo Miyagawa

7

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Kunihiro Kitamura

8

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Kin-ichiro Miura

9

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Toshimasa Ishida

10

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language of work or name

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publication date

1 December 2005

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Biochimica et Biophysica Acta

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1753

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191-208

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2

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Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

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https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Biophysical studies of eIF4E cap-binding protein: recognition of mRNA 5' cap structure and synthetic fragments of eIF4G and 4E-BP1 proteins

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Structural Features of Human Initiation Factor 4E, Studied by X-ray Crystal Analyses and Molecular Dynamics Simulations

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

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Raster3D: photorealistic molecular graphics

1 reference

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based on heuristic

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Cocrystal structure of the messenger RNA 5' cap-binding protein (eIF4E) bound to 7-methyl-GDP

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Ribosome loading onto the mRNA cap is driven by conformational coupling between eIF4G and eIF4E

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

The mRNA 5' cap-binding protein eIF4E and control of cell growth

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Eukaryotic translation initiation factors and regulators

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

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based on heuristic

inferred from DOI database lookup

Cap-dependent translation initiation in eukaryotes is regulated by a molecular mimic of eIF4G

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Insulin-dependent stimulation of protein synthesis by phosphorylation of a regulator of 5'-cap function

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Structure of translation factor eIF4E bound to m7GDP and interaction with 4E-binding protein

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Crystal structures of 7-methylguanosine 5'-triphosphate (m(7)GTP)- and P(1)-7-methylguanosine-P(3)-adenosine-5',5'-triphosphate (m(7)GpppA)-bound human full-length eukaryotic initiation factor 4E: biological importance of the C-terminal flexible reg

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Comparison of simple potential functions for simulating liquid water

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Molecular dynamics with coupling to an external bath

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Atomic-level accuracy in simulations of large protein crystals

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Tyr-317 phosphorylation increases Shc structural rigidity and reduces coupling of domain motions remote from the phosphorylation site as revealed by molecular dynamics simulations.

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Regulation of human eIF4E by 4E-BP1: binding analysis using surface plasmon resonance

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Repressor binding to a dorsal regulatory site traps human eIF4E in a high cap-affinity state

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Expression of a synthetic gene for initiation factor 4E-binding protein 1 in Escherichia coli and its interaction with eIF-4E and eIF-4E x m7GTP complex

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Binding analysis of Xenopus laevis translation initiation factor 4E (eIF4E) in initiation complex formation.

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Direct expression of a synthetic gene in Escherichia coli: purification and physicochemical properties of human initiation factor 4E.

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Initiation of protein synthesis in eukaryotic cells

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Analysis of the mRNA cap-binding ability of human eukaryotic initiation factor-4E by use of recombinant wild-type and mutant forms

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

The translation initiation factor eIF-4E binds to a common motif shared by the translation factor eIF-4 gamma and the translational repressors 4E-binding proteins

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

eIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation

1 reference

https://api.crossref.org/works/10.1016%2FJ.BBAPAP.2005.07.023

7 January 2021

based on heuristic

inferred from DOI database lookup

Structural and thermodynamic behavior of eukaryotic initiation factor 4E in supramolecular formation with 4E-binding protein 1 and mRNA cap analogue, studied by spectroscopic methods

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1016/J.BBAPAP.2005.07.023

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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