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An unconventional human Ccr4-Caf1 deadenylase complex in nuclear cajal bodies
scientific article
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scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
title
An unconventional human Ccr4-Caf1 deadenylase complex in nuclear cajal bodies
(English)
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
main subject
cell biology
0 references
Cajal body
0 references
Target of EGR1, exonuclease
1 reference
stated in
GOA release 2020-03-11
Angel homolog 2
1 reference
stated in
GOA release 2020-03-11
RNA phosphodiester bond hydrolysis, exonucleolytic
1 reference
stated in
GOA release 2020-03-11
author
Jens Lykke-Andersen
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
author name string
Eileen Wagner
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
Sandra L Clement
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
language of work or name
English
0 references
publication date
18 December 2006
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
published in
Molecular and Cellular Biology
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
volume
27
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
issue
5
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
page(s)
1686-1695
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
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CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase
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Identification of four families of yCCR4- and Mg2+-dependent endonuclease-related proteins in higher eukaryotes, and characterization of orthologs of yCCR4 with a conserved leucine-rich repeat essential for hCAF1/hPOP2 binding
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Purified U7 snRNPs lack the Sm proteins D1 and D2 but contain Lsm10, a new 14 kDa Sm D1-like protein
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Communication of the position of exon-exon junctions to the mRNA surveillance machinery by the protein RNPS1
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Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon
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Coiled bodies preferentially associate with U4, U11, and U12 small nuclear RNA genes in interphase HeLa cells but not with U6 and U7 genes
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Coiled bodies contain U7 small nuclear RNA and associate with specific DNA sequences in interphase human cells
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Yeast Trf5p is a nuclear poly(A) polymerase
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19 March 2017
Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase
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19 March 2017
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19 March 2017
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19 March 2017
Ccr4p is the catalytic subunit of a Ccr4p/Pop2p/Notp mRNA deadenylase complex in Saccharomyces cerevisiae
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PubMed Central
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19 March 2017
The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae
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19 March 2017
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19 March 2017
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19 March 2017
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7 April 2017
A nuclear degradation pathway controls the abundance of normal mRNAs in Saccharomyces cerevisiae
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27 September 2017
PHAX and CRM1 are required sequentially to transport U3 snoRNA to nucleoli
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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27 September 2017
Nuclear pre-mRNA decapping and 5' degradation in yeast require the Lsm2-8p complex.
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27 September 2017
A complex containing the CCR4 and CAF1 proteins is involved in mRNA deadenylation in Drosophila
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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27 September 2017
Telomerase RNA Accumulates in Cajal Bodies in Human Cancer Cells
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27 September 2017
Degradation of normal mRNA in the nucleus of Saccharomyces cerevisiae
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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27 September 2017
Nocturnin, a deadenylase in Xenopus laevis retina: a mechanism for posttranscriptional control of circadian-related mRNA.
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PubMed Central
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27 September 2017
In vivo cloning and characterization of a new growth suppressor protein TOE1 as a direct target gene of Egr1.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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27 September 2017
RNA-mediated interaction of Cajal bodies and U2 snRNA genes.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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27 September 2017
Replication-dependent histone gene expression is related to Cajal body (CB) association but does not require sustained CB contact
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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27 September 2017
Interactions of U2 gene loci and their nuclear transcripts with Cajal (coiled) bodies: evidence for PreU2 within Cajal bodies
1 reference
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reference URL
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27 September 2017
Coiled bodies and U2 snRNA genes adjacent to coiled bodies are enriched in factors required for snRNA transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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27 September 2017
Human genes encoding U3 snRNA associate with coiled bodies in interphase cells and are clustered on chromosome 17p11.2 in a complex inverted repeat structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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27 September 2017
Identification of a novel vertebrate circadian clock-regulated gene encoding the protein nocturnin
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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27 September 2017
Nucleoplasmic organization of small nuclear ribonucleoproteins in cultured human cells.
1 reference
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PubMed Central
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27 September 2017
Human telomerase RNA and box H/ACA scaRNAs share a common Cajal body-specific localization signal.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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30 May 2018
Transcription-dependent colocalization of the U1, U2, U4/U6, and U5 snRNPs in coiled bodies
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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30 May 2018
Mouse CAF1 can function as a processive deadenylase/3'-5'-exonuclease in vitro but in yeast the deadenylase function of CAF1 is not required for mRNA poly(A) removal
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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29 November 2018
Monitoring mRNA decapping activity.
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
retrieved
29 November 2018
CCR4 is a glucose-regulated transcription factor whose leucine-rich repeat binds several proteins important for placing CCR4 in its proper promoter context
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1820451
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29 November 2018
U2 and U1 snRNA gene loci associate with coiled bodies
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17178830
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1128/MCB.01483-06
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
Fatcat ID
release_7a7xe47xy5e3ffsmvobkcxakuy
1 reference
stated in
Fatcat
reference URL
https://api.fatcat.wiki/v0/release/7a7xe47xy5e3ffsmvobkcxakuy
retrieved
24 November 2022
based on heuristic
mapped directly with Wikidata item
PMCID
1820451
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
PubMed ID
17178830
1 reference
stated in
Europe PubMed Central
PMCID
1820451
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17178830%20AND%20SRC:MED&resulttype=core&format=json
retrieved
23 December 2019
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