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(Q24395943)
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English
Vsx1
protein-coding gene in the species Rattus norvegicus
visual system homeobox 1
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Statements
instance of
gene
1 reference
stated in
ensembl Release 105
Ensembl gene ID
ENSRNOG00000042220
subclass of
protein-coding gene
1 reference
stated in
Ensembl Release 87
Ensembl gene ID
ENSRNOG00000042220
found in taxon
brown rat
1 reference
stated in
ensembl Release 105
Ensembl gene ID
ENSRNOG00000042220
encodes
Visual system homeobox 1
1 reference
stated in
UniProt
retrieved
6 July 2017
UniProt protein ID
D3ZQZ0
chromosome
Rattus norvegicus chromosome 3
1 reference
stated in
ensembl Release 105
Ensembl gene ID
ENSRNOG00000042220
strand orientation
reverse strand
1 reference
stated in
ensembl Release 105
Ensembl gene ID
ENSRNOG00000042220
genomic start
139514270
chromosome
Rattus norvegicus chromosome 3
1 reference
stated in
ensembl Release 105
Ensembl gene ID
ENSRNOG00000042220
genomic end
139521869
chromosome
Rattus norvegicus chromosome 3
1 reference
stated in
ensembl Release 105
Ensembl gene ID
ENSRNOG00000042220
cytogenetic location
3q41
1 reference
stated in
NCBI Gene
retrieved
13 February 2022
Entrez Gene ID
689704
HomoloGene ID
8743
1 reference
stated in
NCBI Gene
retrieved
13 February 2022
Entrez Gene ID
689704
ortholog
Vsx1
found in taxon
house mouse
1 reference
stated in
HomoloGene build68
HomoloGene ID
8743
VSX1
found in taxon
Homo sapiens
1 reference
stated in
HomoloGene build68
HomoloGene ID
8743
vsx1
found in taxon
Danio rerio
1 reference
stated in
Orthologous MAtrix
reference URL
https://omabrowser.org/oma/vps/D3ZQZ0/
expressed in
thymus
series ordinal
1
1 reference
stated in
Bgee
retrieved
29 April 2022
reference URL
https://bgee.org/bgee15_0/gene/ENSRNOG00000042220
spleen
series ordinal
2
1 reference
stated in
Bgee
retrieved
29 April 2022
reference URL
https://bgee.org/bgee15_0/gene/ENSRNOG00000042220
ileum
series ordinal
3
1 reference
stated in
Bgee
retrieved
29 April 2022
reference URL
https://bgee.org/bgee15_0/gene/ENSRNOG00000042220
duodenum
series ordinal
4
1 reference
stated in
Bgee
retrieved
29 April 2022
reference URL
https://bgee.org/bgee15_0/gene/ENSRNOG00000042220
colon
series ordinal
5
1 reference
stated in
Bgee
retrieved
29 April 2022
reference URL
https://bgee.org/bgee15_0/gene/ENSRNOG00000042220
jejunum
series ordinal
6
1 reference
stated in
Bgee
retrieved
29 April 2022
reference URL
https://bgee.org/bgee15_0/gene/ENSRNOG00000042220
exact match
http://identifiers.org/ncbigene/689704
1 reference
stated in
Identifiers.org
reference URL
http://www.ebi.ac.uk/miriam/main/collections/MIR:00000069
Identifiers
RefSeq RNA ID
NM_001109546
1 reference
stated in
NCBI Gene
retrieved
13 February 2022
Entrez Gene ID
689704
Entrez Gene ID
689704
1 reference
stated in
NCBI Gene
retrieved
13 February 2022
Entrez Gene ID
689704
Ensembl gene ID
ENSRNOG00000042220
1 reference
stated in
ensembl Release 105
Ensembl gene ID
ENSRNOG00000042220
Ensembl transcript ID
ENSRNOT00000061469
1 reference
stated in
ensembl Release 105
Ensembl gene ID
ENSRNOG00000042220
Rat Genome Database ID
1305667
1 reference
stated in
NCBI Gene
retrieved
13 February 2022
Entrez Gene ID
689704
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