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Accelerated probabilistic inference of RNA structure evolution
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instance of
scholarly article
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title
Accelerated probabilistic inference of RNA structure evolution
(English)
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main subject
Stemloc
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author
Ian Holmes
object named as
Ian Holmes
series ordinal
1
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language of work or name
English
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publication date
2005
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published in
BMC Bioinformatics
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volume
6
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issue
1
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page(s)
73
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cites work
ProbCons: Probabilistic consistency-based multiple sequence alignment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
A probabilistic model for the evolution of RNA structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
MSARI: multiple sequence alignments for statistical detection of RNA secondary structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
Rfam: an RNA family database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
Noncoding RNA gene detection using comparative sequence analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
RNA sequence analysis using covariance models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
The functions of animal microRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
Identification of common molecular subsequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
RNA silencing in plants
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
Alignment of RNA base pairing probability matrices
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
Dynalign: an algorithm for finding the secondary structure common to two RNA sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
The equilibrium partition function and base pair binding probabilities for RNA secondary structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
24 March 2017
Fast and sensitive multiple sequence alignments on a microcomputer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
7 April 2017
Finding the common structure shared by two homologous RNAs.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
27 September 2017
Noncoding RNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
27 September 2017
RNA secondary structure prediction using stochastic context-free grammars and evolutionary history
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
27 September 2017
Dynamic programming alignment accuracy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
27 September 2017
Finding the most significant common sequence and structure motifs in a set of RNA sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
27 September 2017
Stochastic context-free grammars for tRNA modeling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
27 September 2017
Amino acid substitution matrices from an information theoretic perspective
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
27 September 2017
Comparing multiple RNA secondary structures using tree comparisons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
27 September 2017
RNA pseudoknot modeling using intersections of stochastic context free grammars with applications to database search.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
30 May 2018
A new algorithm for best subsequence alignments with application to tRNA-rRNA comparisons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
30 May 2018
Pairwise RNA structure comparison with stochastic context-free grammars.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
29 November 2018
Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1090553
retrieved
29 November 2018
Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15790387
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1186/1471-2105-6-73
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DBLP publication ID
journals/bmcbi/Holmes05
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
Dimensions Publication ID
1048566346
0 references
Fatcat ID
release_gm7hymh7ffedpnywrxpuwii5li
0 references
PMC publication ID
1090553
0 references
PubMed publication ID
15790387
0 references
ResearchGate publication ID
7946280
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