(Q24529121)

3 July 2017

title

Structural basis of NEDD8 ubiquitin discrimination by the deNEDDylating enzyme NEDP1. (English)

1 reference

3 July 2017

author

James Henderson Naismith

5

1 reference

3 July 2017

6

1 reference

3 July 2017

Huanting Liu

2

0 references

author name string

Lin-nan Shen

1

1 reference

3 July 2017

Changjiang Dong

3

1 reference

3 July 2017

Dimitris Xirodimas

4

1 reference

3 July 2017

language of work or name

English

0 references

publication date

17 March 2005

1 reference

3 July 2017

1 reference

3 July 2017

volume

24

1 reference

3 July 2017

issue

7

1 reference

3 July 2017

page(s)

1341-1351

1 reference

Structure of the Cand1-Cul1-Roc1 complex reveals regulatory mechanisms for the assembly of the multisubunit cullin-dependent ubiquitin ligases

3 July 2017

cites work

1 reference

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Identification of a novel isopeptidase with dual specificity for ubiquitin- and NEDD8-conjugated proteins

24 March 2017

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The Rbx1 subunit of SCF and VHL E3 ubiquitin ligase activates Rub1 modification of cullins Cdc53 and Cul2

24 March 2017

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SUMO-1 modification activates the transcriptional response of p53

24 March 2017

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Identification of the activating and conjugating enzymes of the NEDD8 conjugation pathway

24 March 2017

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A new NEDD8-ligating system for cullin-4A

24 March 2017

1 reference

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Characterization of NEDD8, a developmentally down-regulated ubiquitin-like protein

24 March 2017

1 reference

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

24 March 2017

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The structure of the APPBP1-UBA3-NEDD8-ATP complex reveals the basis for selective ubiquitin-like protein activation by an E1

24 March 2017

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Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde

24 March 2017

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Ulp1-SUMO crystal structure and genetic analysis reveal conserved interactions and a regulatory element essential for cell growth in yeast

24 March 2017

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Structural basis for the specificity of ubiquitin C-terminal hydrolases

24 March 2017

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Crystal structure of the human ubiquitin-like protein NEDD8 and interactions with ubiquitin pathway enzymes

24 March 2017

1 reference

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Refinement of macromolecular structures by the maximum-likelihood method

24 March 2017

1 reference

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The CCP4 suite: programs for protein crystallography

24 March 2017

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Efficient anisotropic refinement of macromolecular structures using FFT

24 March 2017

1 reference

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Preparation of selenomethionyl proteins for phase determination

24 March 2017

1 reference

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Improved methods for building protein models in electron density maps and the location of errors in these models

24 March 2017

1 reference

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Role of predicted metalloprotease motif of Jab1/Csn5 in cleavage of Nedd8 from Cul1.

24 March 2017

1 reference

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A novel protein modification pathway related to the ubiquitin system

24 March 2017

1 reference

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Modification of yeast Cdc53p by the ubiquitin-related protein rub1p affects function of the SCFCdc4 complex

24 March 2017

1 reference

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Structure of a complex between Nedd8 and the Ulp/Senp protease family member Den1

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

A basis for SUMO protease specificity provided by analysis of human Senp2 and a Senp2-SUMO complex

24 March 2017

1 reference

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Mdm2-mediated NEDD8 conjugation of p53 inhibits its transcriptional activity

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

DEN1 is a dual function protease capable of processing the C terminus of Nedd8 and deconjugating hyper-neddylated CUL1

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

Identification and characterization of DEN1, a deneddylase of the ULP family

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

NEDP1, a highly conserved cysteine protease that deNEDDylates Cullins

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

The Nedd8-conjugated ROC1-CUL1 core ubiquitin ligase utilizes Nedd8 charged surface residues for efficient polyubiquitin chain assembly catalyzed by Cdc34

24 March 2017

1 reference

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The NEDD8 system is essential for cell cycle progression and morphogenetic pathway in mice

24 March 2017

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Expression and functional analysis of Uch-L3 during mouse development

24 March 2017

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SCF and Cullin/Ring H2-based ubiquitin ligases

24 March 2017

1 reference

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ARP/wARP's model-building algorithms. I. The main chain

7 April 2017

1 reference

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Cullin-based ubiquitin ligase and its control by NEDD8-conjugating system

7 April 2017

1 reference

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pVHL modification by NEDD8 is required for fibronectin matrix assembly and suppression of tumor development

27 September 2017

1 reference

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Ubiquitin-like protein activation.

27 September 2017

1 reference

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The RUB/Nedd8 conjugation pathway is required for early development in Arabidopsis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

Nedd8-modification of Cul1 is promoted by Roc1 as a Nedd8-E3 ligase and regulates its stability

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

Rub1p processing by Yuh1p is required for wild-type levels of Rub1p conjugation to Cdc53p

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

NEDD8 recruits E2-ubiquitin to SCF E3 ligase.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

Ubiquitin and its kin: how close are the family ties?

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

A Nedd8 conjugation pathway is essential for proteolytic targeting of p27Kip1 by ubiquitination

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

Identification of an SCF ubiquitin-ligase complex required for auxin response in Arabidopsis thaliana

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

Cleavage of the C-terminus of NEDD8 by UCH-L3.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

The ts41 mutation in Chinese hamster cells leads to successive S phases in the absence of intervening G2, M, and G1

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

Neddylation and deneddylation of CUL-3 is required to target MEI-1/Katanin for degradation at the meiosis-to-mitosis transition in C. elegans.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

The ubiquitin-related protein RUB1 and auxin response in Arabidopsis

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1142549

Protein stability: the COP9 signalosome gets in on the act

29 November 2018

1 reference

12 December 2020

Production of selenomethionine-labelled proteins using simplified culture conditions and generally applicable host/vector systems

1 reference

12 December 2020

Ubiquitin branches out

1 reference

12 December 2020

Processing of X-ray diffraction data collected in oscillation mode

1 reference

12 December 2020

[29] Preparation of selenomethionyl proteins for phase determination

1 reference

12 December 2020

Mechanism of ubiquitin carboxyl-terminal hydrolase. Borohydride and hydroxylamine inactivate in the presence of ubiquitin

1 reference

12 December 2020

Multiwavelength anomalous diffraction phasing of macromolecular structures: analysis of MAD data as single isomorphous replacement with anomalous scattering data using the MADMRG Program

1 reference

12 December 2020

An improved PCR-based method for site directed mutagenesis using megaprimers

1 reference

12 December 2020

ARP/wARP's model-building algorithms. I. The main chain

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSJ.EMBOJ.7600628

7 January 2021

inferred from DOI database lookup

AMoRe: an automated package for molecular replacement

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSJ.EMBOJ.7600628

7 January 2021

inferred from DOI database lookup

[30] Multiwavelength anomalous diffraction phasing of macromolecular structures: Analysis of MAD data as single isomorphous replacement with anomalous scattering data using the MADMRG program

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSJ.EMBOJ.7600628

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/SJ.EMBOJ.7600628

1 reference

OpenCitations bibliographic resource ID

3 July 2017

4564368

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4564368

1 reference