(Q24530540)

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YASS: enhancing the sensitivity of DNA similarity search

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YASS: enhancing the sensitivity of DNA similarity search (English)

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Laurent Noé

1

Laurent

Noé

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19 October 2023

Gregory Kucherov

2

Gregory

Kucherov

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19 October 2023

language of work or name

English

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publication date

1 July 2005

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published in

Nucleic Acids Research

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volume

33

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page(s)

W540-3

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issue

Web Server issue

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cites work

Improved hit criteria for DNA local alignment

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

24 March 2017

Human-mouse alignments with BLASTZ

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

24 March 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

24 March 2017

Improved tools for biological sequence comparison

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

24 March 2017

Basic local alignment search tool

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

24 March 2017

Tandem repeats finder: a program to analyze DNA sequences

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

24 March 2017

Identification of common molecular subsequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

24 March 2017

Patternhunter II: highly sensitive and fast homology search

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

24 March 2017

PatternHunter: faster and more sensitive homology search

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

24 March 2017

A unifying framework for seed sensitivity and its application to subset seeds

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

30 May 2018

Good spaced seeds for homology search.

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

29 November 2018

FLASH: a fast look-up algorithm for string homology.

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160238

retrieved

29 November 2018

Identifiers

DOI

10.1093/NAR/GKI478

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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DBLP Dataset 2021-01-02

retrieved

28 January 2021

Fatcat ID

release_2lcmu7vqxng2bgvneny3phsbwi

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OpenCitations bibliographic resource ID

1592765

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1592765

ResearchGate publication ID

7762400

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(Q24530540)

YASS: enhancing the sensitivity of DNA similarity search

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