(Q24563470)

27 June 2017

Approximate protein structural alignment in polynomial time (English)

1 reference

27 June 2017

1

Rachel Kolodny

1 reference

27 June 2017

Nathan Linial

2

1 reference

PubMed ID

15304646

27 June 2017

language of work or name

English

0 references

publication date

10 August 2004

1 reference

Proceedings of the National Academy of Sciences of the United States of America

27 June 2017

1 reference

27 June 2017

101

1 reference

27 June 2017

12201-12206

1 reference

27 June 2017

33

1 reference

27 June 2017

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

The structural alignment between two proteins: is there a unique answer?

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

The relation between the divergence of sequence and structure in proteins

24 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

24 March 2017

https://api.crossref.org/works/10.1073%2FPNAS.0404383101

inferred from DOI database lookup

7 January 2021

based on heuristic

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

CATH--a hierarchic classification of protein domain structures

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Protein structure comparison by alignment of distance matrices

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

SCOP: a structural classification of proteins database for the investigation of sequences and structures

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Protein structure alignment

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Protein structure similarities.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Computational methods for the structural alignment of molecules

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Protein structure alignment using a genetic algorithm.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Regression analysis of multiple protein structures

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Improved genetic algorithm-based protein structure comparisons: pairwise and multiple superpositions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Threading a database of protein cores

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Structural superposition of proteins with unknown alignment and detection of topological similarity using a six-dimensional search algorithm

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Regularities in interaction patterns of globular proteins

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Easy adaptation of protein structure to sequence

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

The FSSP database of structurally aligned protein fold families

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Comparison of spatial arrangements of secondary structural elements in proteins.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Molecular dynamics simulations in biology

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Efficient detection of three-dimensional structural motifs in biological macromolecules by computer vision techniques

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Effects of compact volume and chain stiffness on the conformations of native proteins

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Families and the structural relatedness among globular proteins

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514457

Detection of common three-dimensional substructures in proteins

30 May 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404383101

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404383101

Structure comparison and structure patterns.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404383101

Optimum superimposition of protein structures: ambiguities and implications.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404383101

A discussion of the solution for the best rotation to relate two sets of vectors

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404383101

Animating rotation with quaternion curves

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404383101

Using iterative dynamic programming to obtain accurate pairwise and multiple alignments of protein structures

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15304646

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404383101

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1073/PNAS.0404383101

1 reference

27 June 2017

0 references

0 references

1 reference

PubMed ID

15304646