(Q24564226)

English

Genetic exchange and plasmid transfers in Borrelia burgdorferi sensu stricto revealed by three-way genome comparisons and multilocus sequence typing

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15375210%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

Genetic exchange and plasmid transfers in Borrelia burgdorferi sensu stricto revealed by three-way genome comparisons and multilocus sequence typing (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15375210%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

Borrelia burgdorferi

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Claire M. Fraser

7

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15375210%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

Sherwood Casjens

8

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15375210%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

Benjamin J. Luft

9

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1 January 2020

3

object named as

John F Bruno

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1 January 2020

author name string

Wei-Gang Qiu

1

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1 January 2020

Steven E Schutzer

2

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1 January 2020

Oliver Attie

4

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1 January 2020

Yun Xu

5

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1 January 2020

John J Dunn

6

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1 January 2020

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16 September 2004

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1 January 2020

Proceedings of the National Academy of Sciences of the United States of America

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Europe PubMed Central

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1 January 2020

101

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1 January 2020

39

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15375210%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

14150-14155

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15375210%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

Sequencing and comparison of yeast species to identify genes and regulatory elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

Initial sequencing and comparative analysis of the mouse genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

Crystal structure of outer surface protein C (OspC) from the Lyme disease spirochete, Borrelia burgdorferi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

MRBAYES: Bayesian inference of phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

Improved microbial gene identification with GLIMMER

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

A bacterial genome in flux: the twelve linear and nine circular extrachromosomal DNAs in an infectious isolate of the Lyme disease spirochete Borrelia burgdorferi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

24 March 2017

The Ka/Ks ratio: diagnosing the form of sequence evolution

2 references

https://api.crossref.org/works/10.1073/PNAS.0402745101

22 April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

7 April 2017

Lyme disease-a tick-borne spirochetosis?

2 references

https://api.crossref.org/works/10.1073/PNAS.0402745101

22 April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

7 April 2017

THE RELATION OF RECOMBINATION TO MUTATIONAL ADVANCE

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

7 April 2017

Fast algorithms for large-scale genome alignment and comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

7 April 2017

Multilocus sequence typing scheme for bacteria of the Bacillus cereus group.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

How clonal is Staphylococcus aureus?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Molecular patchwork: Chromosomal recombination between two Helicobacter pylori strains during natural colonization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Microevolutionary genomics of bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Geographic uniformity of the Lyme disease spirochete (Borrelia burgdorferi) and its shared history with tick vector (Ixodes scapularis) in the Northeastern United States

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Evaluation of methods for detecting recombination from DNA sequences: computer simulations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

The relative contributions of recombination and point mutation to the diversification of bacterial clones

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Recombination and the population structures of bacterial pathogens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Transduction by phiBB-1, a bacteriophage of Borrelia burgdorferi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

The implications of a low rate of horizontal transfer in Borrelia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Population structure and evolutionary dynamics of pathogenic bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Minisatellite marker analysis of Trypanosoma brucei: reconciliation of clonal, panmictic, and epidemic population genetic structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Borrelia genomes in the year 2000.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Estimating recombinational parameters in Streptococcus pneumoniae from multilocus sequence typing data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Association of specific subtypes of Borrelia burgdorferi with hematogenous dissemination in early Lyme disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Four clones of Borrelia burgdorferi sensu stricto cause invasive infection in humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Bacterial population genetics, evolution and epidemiology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Molecular epidemiology of the aetiological agents of Lyme borreliosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Genetic diversity of ospC in a local population of Borrelia burgdorferi sensu stricto

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Free recombination within Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Genetic variation of the Borrelia burgdorferi gene vlsE involves cassette-specific, segmental gene conversion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Directed insertion of a selectable marker into a circular plasmid of Borrelia burgdorferi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Analysis of the genetic polymorphism of Borrelia burgdorferi sensu lato by multilocus enzyme electrophoresis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Borrelia burgdorferi is clonal: implications for taxonomy and vaccine development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Genetic transformation of the Lyme disease agent Borrelia burgdorferi with coumarin-resistant gyrB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Analysis of the distribution and molecular heterogeneity of the ospD gene among the Lyme disease spirochetes: evidence for lateral gene exchange

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Linear chromosomes of Lyme disease agent spirochetes: genetic diversity and conservation of gene order.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Adherence of Borrelia burgdorferi to the proteoglycan decorin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Nucleotide polymorphism at the alcohol dehydrogenase locus of Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Duration of tick attachment and Borrelia burgdorferi transmission.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Lyme borreliosis: relation of its causative agent to its vectors and hosts in North America and Europe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Recombination in Escherichia coli and the definition of biological species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Statistical methods of DNA sequence analysis: detection of intragenic recombination or gene conversion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

27 September 2017

Comparative full-length genome sequence analysis of 14 SARS coronavirus isolates and common mutations associated with putative origins of infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

30 May 2018

Clonal descent and microevolution of Neisseria meningitidis during 30 years of epidemic spread

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

30 May 2018

Gene conversion in the evolution of the human and chimpanzee MHC class I loci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

30 May 2018

Intra- and interbacterial genetic exchange of Lyme disease spirochete erp genes generates sequence identity amidst diversity

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0402745101

21 January 2018

Complement Resistance of Borrelia burgdorferi Correlates with the Expression of BbCRASP-1, a Novel Linear Plasmid-encoded Surface Protein That Interacts with Human Factor H and FHL-1 and Is Unrelated to Erp Proteins

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0402745101

21 January 2018

Clonal divergence in Escherichia coli as a result of recombination, not mutation

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0402745101

21 January 2018

Detection of recombination among Salmonella enterica strains using the incongruence length difference test.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0402745101

21 January 2018

Identification and interrogation of highly informative single nucleotide polymorphism sets defined by bacterial multilocus sequence typing databases.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0402745101

21 January 2018

Recombination and clonality in natural populations of Escherichia coli.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0402745101

21 January 2018

Statistical tests for detecting gene conversion.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=521097

28 November 2018

Detecting recombination from gene trees

1 reference

https://pubmed.ncbi.nlm.nih.gov/15375210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Experimental Lyme arthritis in rats infected with Borrelia burgdorferi

1 reference

https://pubmed.ncbi.nlm.nih.gov/15375210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic heterogeneity of Borrelia burgdorferi in the United States

1 reference

https://pubmed.ncbi.nlm.nih.gov/15375210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic exchange and evolutionary divergence in prokaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15375210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.0402745101

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15375210%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

2004PNAS..10114150Q

0 references

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15375210%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

PubMed publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15375210%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

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