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Infernal 1.0: inference of RNA alignments
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instance of
scholarly article
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title
Infernal 1.0: inference of RNA alignments
(English)
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main subject
Infernal
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author
Sean Eddy
series ordinal
3
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Eric P. Nawrocki
series ordinal
1
object named as
Eric P Nawrocki
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Diana L Kolbe
series ordinal
2
object named as
Diana L Kolbe
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language of work or name
English
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publication date
15 May 2009
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published in
Bioinformatics
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stated in
PubMed
volume
25
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page(s)
1335-7
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issue
10
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cites work
Rfam: updates to the RNA families database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732312
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Query-dependent banding (QDB) for faster RNA similarity searches
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PubMed Central
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7 April 2017
Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA
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7 April 2017
RSEARCH: finding homologs of single structured RNA sequences
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7 April 2017
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
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7 April 2017
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
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reference URL
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7 April 2017
RNA sequence analysis using covariance models
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PubMed Central
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7 April 2017
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
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7 April 2017
Fast and accurate search for non-coding RNA pseudoknot structures in genomes
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Direct RNA motif definition and identification from multiple sequence alignments using secondary structure profiles
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Searching genomes for noncoding RNA using FastR.
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retrieved
28 November 2018
Small subunit ribosomal RNA modeling using stochastic context-free grammars
1 reference
stated in
PubMed
reference URL
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retrieved
12 December 2020
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inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/BIOINFORMATICS/BTP157
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
72196
DBLP publication ID
journals/bioinformatics/NawrockiKE09
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
OpenCitations bibliographic resource ID
72196
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
72196
PMCID
2732312
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
72196
PubMed ID
19307242
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
72196
ResearchGate publication ID
24220577
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Semantic Scholar paper ID
106d80ddffc0b693c0c463b17a6abc451d833766
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