(Q24649374)

2

Christine Ladd-Acosta

0 references

Bo Wen

Bo Wen

3

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Zhijin Wu

Zhijin Wu

4

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Andrew P. Feinberg

Andrew P Feinberg

14

0 references

Rafael Irizarry

1

Rafael A Irizarry

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author name string

Carolina Montano

5

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Patrick Onyango

6

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Hengmi Cui

7

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Kevin Gabo

8

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Michael Rongione

9

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Maree Webster

10

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Hong Ji

11

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James B Potash

12

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Sarven Sabunciyan

SNP-specific array-based allele-specific expression analysis

13

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language of work or name

English

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publication date

February 2009

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published in

Nature Genetics

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volume

41

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issue

2

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page(s)

178-86

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

DNA methylation profiling of human chromosomes 6, 20 and 22

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Comprehensive analysis of CpG islands in human chromosomes 21 and 22

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Epigenetic gene silencing in cancer – a mechanism for early oncogenic pathway addiction?

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

CpG islands in vertebrate genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Frequent loss of imprinting of PEG1/MEST in invasive breast cancer

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

7 April 2017

1 reference

https://api.crossref.org/works/10.1038/NG.298

Bioconductor: open software development for computational biology and bioinformatics

22 April 2017

1 reference

https://api.crossref.org/works/10.1038/NG.298

Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

The epigenetic progenitor origin of human cancer

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

The history of cancer epigenetics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Using GOstats to test gene lists for GO term association

7 April 2017

1 reference

Putative direct and indirect Wnt targets identified through consistent gene expression changes in APC-mutant intestinal adenomas from humans and mice

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Antagonism of FOG-1 and GATA factors in fate choice for the mast cell lineage

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

A novel CpG island set identifies tissue-specific methylation at developmental gene loci

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

CG dinucleotide clustering is a species-specific property of the genome

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Inactivation of HOXA genes by hypermethylation in myeloid and lymphoid malignancy is frequent and associated with poor prognosis.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Epigenome scans and cancer genome sequencing converge on WNK2, a kinase-independent suppressor of cell growth

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Gene expression signatures for tumor progression, tumor subtype, and tumor thickness in laser-microdissected melanoma tissues

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Distinct effects on gene expression of chemical and genetic manipulation of the cancer epigenome revealed by a multimodality approach.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

DNA methylation in cancer: too much, but also too little

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

DBTSS: database of transcription start sites, progress report 2008.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

Truncating mutations in the Fanconi anemia J gene BRIP1 are low-penetrance breast cancer susceptibility alleles

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2729128

DNA methylation analysis by pyrosequencing

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19151715

12 December 2020

inferred from PubMed ID database lookup

Hypomethylation distinguishes genes of some human cancers from their normal counterparts

1 reference

7 January 2021

Comprehensive high-throughput arrays for relative methylation (CHARM).

1 reference

7 January 2021

CpG islands as genomic footprints of promoters that are associated with replication origins.

1 reference

7 January 2021

The positive false discovery rate: a Bayesian interpretation and the q -value

1 reference

7 January 2021

Global, voxel, and cluster tests, by theory and permutation, for a difference between two groups of structural MR images of the brain

1 reference

7 January 2021

Empirical Bayes Analysis of a Microarray Experiment

1 reference

7 January 2021

An online database for brain disease research

1 reference

7 January 2021

Identifiers

DOI

10.1038/NG.298

1 reference

Dimensions Publication ID

1032369744

0 references

1 reference

1 reference

PubMed publication ID

19151715

1 reference