(Q24655096)

English

The structure of phosphorylase kinase holoenzyme at 9.9 angstroms resolution and location of the catalytic subunit and the substrate glycogen phosphorylase

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scholarly article

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The structure of phosphorylase kinase holoenzyme at 9.9 angstroms resolution and location of the catalytic subunit and the substrate glycogen phosphorylase (English)

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structural biology

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Catherine Vénien-Bryan

1

object named as

Catherine Vénien-Bryan

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2

object named as

Slavica Jonic

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8

object named as

Louise N Johnson

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author name string

Vasiliki Skamnaki

3

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Nick Brown

4

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Nicolas Bischler

5

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Nikos G Oikonomakos

6

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Nicolas Boisset

7

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language of work or name

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publication date

14 January 2009

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17

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1

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117-27

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Cryoelectron microscopy reveals new features in the three-dimensional structure of phosphorylase kinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Glucoamylase-like domains in the alpha- and beta-subunits of phosphorylase kinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Phosphorylase kinase: the complexity of its regulation is reflected in the complexity of its structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

The crystal structure of a phosphorylase kinase peptide substrate complex: kinase substrate recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Catalytic mechanism of phosphorylase kinase probed by mutational studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Two structures of the catalytic domain of phosphorylase kinase: an active protein kinase complexed with substrate analogue and product

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

The allosteric transition of glycogen phosphorylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Comparison of the binding of glucose and glucose 1-phosphate derivatives to T-state glycogen phosphorylase b

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Conversion of phosphorylase b to phosphorylase a in muscle extracts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Three-dimensional structure of phosphorylase kinase at 22 A resolution and its complex with glycogen phosphorylase b

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

The gamma-subunit of skeletal muscle phosphorylase kinase contains two noncontiguous domains that act in concert to bind calmodulin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Purification and characterization of catalytic fragments of phosphorylase kinase gamma subunit missing a calmodulin-binding domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Molecular basis of signal integration in phosphorylase kinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Visualizing density maps with UCSF Chimera

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

7 April 2017

Caspase-3 dependent cleavage and activation of skeletal muscle phosphorylase b kinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

28 September 2017

Ca2+-induced structural changes in phosphorylase kinase detected by small-angle X-ray scattering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

28 September 2017

Self-association of the alpha subunit of phosphorylase kinase as determined by two-hybrid screening

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

28 September 2017

Characterization of the regulatory domain of the gamma-subunit of phosphorylase kinase. The two noncontiguous calmodulin-binding subdomains are also autoinhibitory.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

28 September 2017

Evidence for the location of the allosteric activation switch in the multisubunit phosphorylase kinase complex from mass spectrometric identification of chemically crosslinked peptides.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

30 May 2018

Effector-sensitive cross-linking of phosphorylase b kinase by the novel cross-linker 4-phenyl-1,2,4-triazoline-3,5-dione

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

30 May 2018

Studies on the subunit structure of trypsin-activated phosphorylase kinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

30 May 2018

Phosphorylase kinase conformers. Detection by proteases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

30 May 2018

An optimized assay of phosphorylase kinase in crude liver preparations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

30 May 2018

A kinetic re-interpretation of the regulation of rabbit skeletal-muscle phosphorylase kinase activity by Ca2+ and phosphorylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

30 May 2018

High and intermediate affinity calmodulin binding domains of the alpha and beta subunits of phosphorylase kinase and their potential role in phosphorylation-dependent activation of the holoenzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

30 May 2018

Kinetic mechanism and specificity of the phosphorylase kinase reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

30 May 2018

FindEM--a fast, efficient program for automatic selection of particles from electron micrographs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

28 November 2018

The regulatory alpha subunit of phosphorylase kinase may directly participate in the binding of glycogen phosphorylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

28 November 2018

Direct visualization of the calmodulin subunit of phosphorylase kinase via electron microscopy following subunit exchange

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

28 November 2018

Activation of skeletal muscle phosphorylase kinase by Ca2+. II. Identification of the kinase activating factor as a proteolytic enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

28 November 2018

Control of phosphorylase activity in a muscle glycogen particle. II. Activation by calcium.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639635

28 November 2018

Calcineurin B-like domains in the large regulatory alpha/beta subunits of phosphorylase kinase

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A Ca(2+)-dependent global conformational change in the 3D structure of phosphorylase kinase obtained from electron microscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phosphorylase kinase from rabbit skeletal muscle

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Subunit phosphorylation and activation of skeletal muscle phosphorylase kinase by the cAMP-dependent protein kinase. Divalent metal ion, ATP, and protein concentration dependence

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analyses of phosphorylase kinase by transmission and scanning transmission electron microscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetic analysis of the separate phosphorylation events in the phosphorylase kinase reaction

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of the phosphorylase kinase γ subunit catalytic domain in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An epitope proximal to the carboxyl terminus of the alpha-subunit is located near the lobe tips of the phosphorylase kinase hexadecamer

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zero length conformation-dependent cross-linking of phosphorylase kinase subunits by transglutaminase

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Divalent cations but not other activators enhance phosphorylase kinase's affinity for glycogen phosphorylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proximal regions of the catalytic gamma and regulatory beta subunits on the interior lobe face of phosphorylase kinase are structurally coupled to each other and with enzyme activation

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zero-length crosslinking of the beta subunit of phosphorylase kinase to the N-terminal half of its regulatory alpha subunit

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activators of phosphorylase kinase alter the cross-linking of its catalytic subunit to the C-terminal one-sixth of its regulatory alpha subunit

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A tentative mechanism of the ternary complex formation between phosphorylase kinase, glycogen phosphorylase b and glycogen

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PURIFICATION AND PROPERTIES OF RABBIT SKELETAL MUSCLE PHOSPHORYLASE B KINASE

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural characterization of Ca2+/CaM in complex with the phosphorylase kinase PhK5 peptide

1 reference

https://pubmed.ncbi.nlm.nih.gov/19141288

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.STR.2008.10.013

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