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tRNADB-CE: tRNA gene database curated manually by experts
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instance of
scholarly article
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title
tRNADB-CE: tRNA gene database curated manually by experts
(English)
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main subject
database
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author name string
Takashi Abe
series ordinal
1
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Toshimichi Ikemura
series ordinal
2
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Yasuo Ohara
series ordinal
3
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Hiroshi Uehara
series ordinal
4
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Makoto Kinouchi
series ordinal
5
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Shigehiko Kanaya
series ordinal
6
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Yuko Yamada
series ordinal
7
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Akira Muto
series ordinal
8
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Hachiro Inokuchi
series ordinal
9
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language of work or name
English
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publication date
January 2009
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published in
Nucleic Acids Research
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volume
37
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page(s)
D163-8
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issue
Database issue
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cites work
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1 reference
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reference URL
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retrieved
7 April 2017
TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase
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7 April 2017
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7 April 2017
Compilation of tRNA sequences and sequences of tRNA genes
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PubMed Central
reference URL
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retrieved
7 April 2017
Rfam: annotating non-coding RNAs in complete genomes
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reference URL
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7 April 2017
ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences
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7 April 2017
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7 April 2017
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
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7 April 2017
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
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7 April 2017
Environmental genome shotgun sequencing of the Sargasso Sea
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7 April 2017
In silico screening of archaeal tRNA-encoding genes having multiple introns with bulge-helix-bulge splicing motifs
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28 September 2017
Differential annotation of tRNA genes with anticodon CAT in bacterial genomes
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28 September 2017
Origin and evolution of group I introns in cyanobacterial tRNA genes
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28 September 2017
Self-splicing group I intron in cyanobacterial initiator methionine tRNA: evidence for lateral transfer of introns in bacteria.
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28 September 2017
SPLITS: a new program for predicting split and intron-containing tRNA genes at the genome level.
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30 May 2018
Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.
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reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686568
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28 November 2018
Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5'- and 3'-halves.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686568
retrieved
28 November 2018
Identifiers
DOI
10.1093/NAR/GKN692
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DBLP publication ID
journals/nar/AbeIOUKKYMI09
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMCID
2686568
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PubMed ID
18842632
0 references
ResearchGate publication ID
23307018
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