(Q39081828)

8 September 2017

Differential annotation of tRNA genes with anticodon CAT in bacterial genomes (English)

1 reference

8 September 2017

Eugeni Belda

2

0 references

Francisco J Silva

object named as

Francisco J Silva

series ordinal

1

0 references

author name string

Santiago E Talens

series ordinal

3

1 reference

8 September 2017

language of work or name

English

0 references

publication date

27 October 2006

1 reference

8 September 2017

Nucleic Acids Research

1 reference

8 September 2017

34

1 reference

8 September 2017

20

1 reference

8 September 2017

6015-6022

1 reference

TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase

8 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

molecular mechanism of lysidine synthesis that determines tRNA identity and codon recognition.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Structural basis for lysidine formation by ATP pyrophosphatase accompanied by a lysine-specific loop and a tRNA-recognition domain

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Compilation of tRNA sequences and sequences of tRNA genes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Determination of the core of a minimal bacterial gene set

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

The complete genome and proteome of Mycoplasma mobile

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Enzymatic conversion of cytidine to lysidine in anticodon of bacterial isoleucyl-tRNA--an alternative way of RNA editing

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Driving change: the evolution of alternative genetic codes.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Decoding the genome: a modified view

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

An RNA-modifying enzyme that governs both the codon and amino acid specificities of isoleucine tRNA.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

The genome sequence of Blochmannia floridanus: comparative analysis of reduced genomes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

9 September 2017

Initiator transfer RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

The neighbor-joining method: a new method for reconstructing phylogenetic trees

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Codon usage bias from tRNA's point of view: redundancy, specialization, and efficient decoding for translation optimization

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Roles of 5-substituents of tRNA wobble uridines in the recognition of purine-ending codons

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Genome rearrangement distances and gene order phylogeny in gamma-Proteobacteria

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

The evolutionary fate of nonfunctional DNA in the bacterial endosymbiont Buchnera aphidicola.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Genome size reduction through multiple events of gene disintegration in Buchnera APS.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635315

Codon recognition patterns as deduced from sequences of the complete set of transfer RNA species in Mycoplasma capricolum. Resemblance to mitochondria

21 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17071718

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKL739

1 reference

release_zxvvoovpyzhe5acsbhsfss2by4

8 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/zxvvoovpyzhe5acsbhsfss2by4

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

8 September 2017

PubMed publication ID

17071718

1 reference