(Q24793847)

2 July 2017

title

Independent binding sites of small protein B onto transfer-messenger RNA during trans-translation (English)

1 reference

2 July 2017

Laurent Metzinger

1

1 reference

2 July 2017

Marc Hallier

series ordinal

2

1 reference

2 July 2017

Brice Felden

series ordinal

3

1 reference

2 July 2017

language of work or name

English

0 references

publication date

28 April 2005

1 reference

2 July 2017

number of pages

11

1 reference

based on heuristic

inferred from page(s)

published in

Nucleic Acids Research

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2 July 2017

volume

33

1 reference

2 July 2017

issue

8

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2 July 2017

page(s)

2384-2394

1 reference

The tmRNA website: reductive evolution of tmRNA in plastids and other endosymbionts

2 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Probing the structure of the Escherichia coli 10Sa RNA (tmRNA).

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Phylogenetic analysis of tmRNA secondary structure.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Visualizing tmRNA entry into a stalled ribosome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Structure of small protein B: the protein component of the tmRNA-SmpB system for ribosome rescue

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Real-time kinetics of HIV-1 Rev-Rev response element interactions. Definition of minimal binding sites on RNA and protein and stoichiometric analysis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Dial tm for rescue: tmRNA engages ribosomes stalled on defective mRNAs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Pre-binding of small protein B to a stalled ribosome triggers trans-translation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

A salvage pathway for protein structures: tmRNA and trans-translation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

tmRNA from Thermus thermophilus. Interaction with alanyl-tRNA synthetase and elongation factor Tu.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

SmpB: a protein that binds to double-stranded segments in tmRNA and tRNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Two-piece tmRNA in cyanobacteria and its structural analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

SmpB functions in various steps of trans-translation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Studies on the Sequence of the 3'-Terminal Region of Turnip-Yellow-Mosaic-Virus RNA

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Resuming translation on tmRNA: a unique mode of determining a reading frame

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

SmpB, a unique RNA-binding protein essential for the peptide-tagging activity of SsrA (tmRNA).

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Synthesis and purification of large amounts of RNA oligonucleotides.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Conformation in solution of yeast tRNA(Asp) transcripts deprived of modified nucleotides.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

The role of SmpB protein in trans-translation.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Simultaneous and functional binding of SmpB and EF-Tu-TP to the alanyl acceptor arm of tmRNA.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Functional and structural analysis of a pseudoknot upstream of the tag-encoded sequence in E. coli tmRNA.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Solution structure of the 3'-end of brome mosaic virus genomic RNAs. Conformational mimicry with canonical tRNAs

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Changing the identity of a tRNA by introducing a G-U wobble pair near the 3' acceptor end.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087783

Three of four pseudoknots in tmRNA are interchangeable and are substitutable with single-stranded RNAs

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15860775

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A nickel complex cleaves uridine in folded RNA structures: application to E. coli tmRNA and related engineered molecules

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15860775

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKI534

1 reference

2 July 2017

0 references

1 reference