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English
siRNAdb: a database of siRNA sequences
scientific article (publication date: 2005)
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Statements
instance of
scholarly article
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title
siRNAdb: a database of siRNA sequences
(English)
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main subject
database
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author
Erik Sonnhammer
series ordinal
4
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Alistair M Chalk
object named as
Alistair M Chalk
series ordinal
1
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author name string
Richard E Warfinge
series ordinal
2
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Patrick Georgii-Hemming
series ordinal
3
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language of work or name
English
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publication date
1 January 2005
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published in
Nucleic Acids Research
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volume
33
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page(s)
D131-4
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issue
Database issue
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cites work
siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
7 April 2017
DEQOR: a web-based tool for the design and quality control of siRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
7 April 2017
Functional siRNAs and miRNAs Exhibit Strand Bias
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
7 April 2017
Asymmetry in the assembly of the RNAi enzyme complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
7 April 2017
RNA interference is mediated by 21- and 22-nucleotide RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
7 April 2017
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
7 April 2017
Post-transcriptional gene silencing by double-stranded RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
7 April 2017
Rational siRNA design for RNA interference
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
7 April 2017
siRNA Selection Server: an automated siRNA oligonucleotide prediction server
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
28 September 2017
Many commonly used siRNAs risk off-target activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
28 September 2017
Guidelines for the selection of highly effective siRNA sequences for mammalian and chick RNA interference
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
28 September 2017
NCBI Reference Sequence project: update and current status
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
28 September 2017
Gene silencing in mammals by small interfering RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
28 September 2017
Improved and automated prediction of effective siRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
28 November 2018
An algorithm for selection of functional siRNA sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540090
retrieved
28 November 2018
Identifiers
DOI
10.1093/NAR/GKI136
0 references
DBLP publication ID
journals/nar/ChalkWGS05
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMCID
540090
0 references
PubMed ID
15608162
0 references
ResearchGate publication ID
8122226
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