(Q24803892)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15627404%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

title

Bioinformatic mapping of AlkB homology domains in viruses (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15627404%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

0 references

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15627404%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

author name string

Marit S Bratlie

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15627404%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

language of work or name

English

0 references

publication date

3 January 2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15627404%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15627404%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

volume

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15627404%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

issue

1

0 references

page(s)

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15627404%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 2.0 Generic

6 January 2020

copyright license

start time

3 January 2005

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

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Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkB

7 April 2017

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Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.

7 April 2017

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RNA-directed DNA methylation in Arabidopsis

7 April 2017

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The DNA-repair protein AlkB, EGL-9, and leprecan define new families of 2-oxoglutarate- and iron-dependent dioxygenases

7 April 2017

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7 April 2017

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7 April 2017

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Amino acid substitution matrices from protein blocks

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Comparison of the genomes of two Xanthomonas pathogens with differing host specificities

7 April 2017

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Cytopathogenicity of border disease virus is correlated with integration of cellular sequences into the viral genome

7 April 2017

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TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

7 April 2017

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MEGA2: molecular evolutionary genetics analysis software

7 April 2017

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Profile hidden Markov models

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

TreeView: an application to display phylogenetic trees on personal computers

7 April 2017

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The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation

7 April 2017

2 references

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Oxidative demethylation by Escherichia coli AlkB directly reverts DNA base damage

7 April 2017

1 reference

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RNA-DNA interactions and DNA methylation in post-transcriptional gene silencing

7 April 2017

1 reference

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Human and bacterial oxidative demethylases repair alkylation damage in both RNA and DNA

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

AlkB-mediated oxidative demethylation reverses DNA damage in Escherichia coli

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Alkylation damage in DNA and RNA--repair mechanisms and medical significance

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Roles for host factors in plant viral pathogenicity

28 September 2017

1 reference

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RNA recombination in vivo in the absence of viral replication

28 September 2017

1 reference

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Plant viral suppressors of RNA silencing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

DNA repair by bacterial AlkB proteins.

28 September 2017

1 reference

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NCBI Reference Sequence project: update and current status

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

AlkB mystery solved: oxidative demethylation of N1-methyladenine and N3-methylcytosine adducts by a direct reversal mechanism.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Composition of alphavirus-like replication complexes: involvement of virus and host encoded proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Post-transcriptional gene silencing in plants.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Gene silencing as an adaptive defence against viruses

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Characterization of the AdoMet-dependent guanylyltransferase activity that is associated with the N terminus of bamboo mosaic virus replicase

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Post-transcriptional gene-silencing: RNAs on the attack or on the defense?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Structural and mechanistic studies on 2-oxoglutarate-dependent oxygenases and related enzymes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Conservation of the putative methyltransferase domain: a hallmark of the 'Sindbis-like' supergroup of positive-strand RNA viruses

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

RNA recombination in animal and plant viruses

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Molecular characterization of Hop latent virus and phylogenetic relationships among viruses closely related to carlaviruses

28 September 2017

1 reference

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A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Activity of organophosphorus insecticides in bacterial tests for mutagenicity and DNA repair--direct alkylation vs. metabolic activation and breakdown. I. Butonate, vinylbutonate, trichlorfon, dichlorvos, demethyl dichlorvos and demethyl vinylbutona

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Sites of methylation of DNA bases by the action of organophosphorus insecticides in vitro.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Methylation of guanine in vivo by the organophosphorus insecticide methamidophos

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Increased viral pathogenicity after insertion of a 28S ribosomal RNA sequence into the haemagglutinin gene of an influenza virus

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Rearrangement of viral sequences in cytopathogenic pestiviruses

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Error thresholds and the constraints to RNA virus evolution

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

Molecular biology: A fix for RNA.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544882

In vitro methylation of DNA by the fumigant methyl bromide

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15627404

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A viral movement protein prevents spread of the gene silencing signal in Nicotiana benthamiana

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15627404

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Modeling amino acid replacement

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15627404

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-6-1

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15627404%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

6 January 2020

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-6-1

9 September 2019

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15627404%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

PubMed publication ID

15627404

2 references