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Comparative promoter region analysis powered by CORG
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scholarly article
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title
Comparative promoter region analysis powered by CORG
(English)
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author
Peter F. Stadler
series ordinal
6
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Peter F Arndt
object named as
Peter F Arndt
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5
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Andrea Tanzer
object named as
Andrea Tanzer
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3
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Martin Vingron
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7
object named as
Martin Vingron
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author name string
Christoph Dieterich
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1
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Steffen Grossmann
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2
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Stefan Röpcke
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4
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language of work or name
English
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publication date
2005
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published in
BMC Genomics
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volume
6
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issue
1
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page(s)
24
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copyright license
Creative Commons Attribution 2.0 Generic
start time
21 February 2005
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April 2022 Public Data File from Crossref
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copyrighted
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April 2022 Public Data File from Crossref
cites work
Fast and reliable prediction of noncoding RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Insights from the rat genome sequence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Integrative annotation of 21,037 human genes validated by full-length cDNA clones
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
The microRNA Registry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Computational identification of Drosophila microRNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Multiple sequence alignment with the Clustal series of programs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
New microRNAs from mouse and human
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Rfam: an RNA family database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
CORG: a database for COmparative Regulatory Genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
A Cajal body-specific pseudouridylation guide RNA is composed of two box H/ACA snoRNA-like domains
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
The distributed annotation system
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Molecular control of vertebrate iron metabolism: mRNA-based regulatory circuits operated by iron, nitric oxide, and oxidative stress
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
The sequence of the stem and flanking sequences at the 3' end of histone mRNA are critical determinants for the binding of the stem-loop binding protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Identification of novel genes coding for small expressed RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
MicroRNA-directed cleavage of HOXB8 mRNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Vertebrate microRNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
The expanding snoRNA world
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Models of molecular evolution and phylogeny
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Serum response factor is essential for mesoderm formation during mouse embryogenesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Srf(-/-) ES cells display non-cell-autonomous impairment in mesodermal differentiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
TRANSFAC: transcriptional regulation, from patterns to profiles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
RefSeq and LocusLink: NCBI gene-centered resources
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
An overview of Ensembl
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Multiple sequence alignment using partial order graphs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
SSAHA: a fast search method for large DNA databases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
7 April 2017
Evolution of microRNAs located within Hox gene clusters
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
Eukaryotic regulatory element conservation analysis and identification using comparative genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
Ets ternary complex transcription factors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
DBTSS, DataBase of Transcriptional Start Sites: progress report 2004.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
Serum response factor: toggling between disparate programs of gene expression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
Factors influencing the identification of transcription factor binding sites by cross-species comparison.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Update 2002.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
SYSTERS, GeneNest, SpliceNest: exploring sequence space from genome to protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
FANTOM DB: database of Functional Annotation of RIKEN Mouse cDNA Clones.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
Conserved noncoding sequences are reliable guides to regulatory elements.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
Basic fibroblast growth factor activates serum response factor gene expression by multiple distinct signaling mechanisms
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
A common RNA structural motif involved in the internal initiation of translation of cellular mRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
Journey to the surface of the cell: Fos regulation and the SRE
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 September 2017
Searching for regulatory elements in human noncoding sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
30 May 2018
On the power of profiles for transcription factor binding site detection.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 November 2018
Distinct changes of genomic biases in nucleotide substitution at the time of Mammalian radiation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 November 2018
Annotating regulatory DNA based on man-mouse genomic comparison
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 November 2018
Expression of the SRF gene occurs through a Ras/Sp/SRF-mediated-mechanism in response to serum growth signals
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555765
retrieved
28 November 2018
Improved sensitivity of nucleic acid database searches using application-specific scoring matrices
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2F1471-2164-6-24
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Models of Molecular Evolution and Phylogeny: Table 1
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2F1471-2164-6-24
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Algorithm 457: finding all cliques of an undirected graph
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2F1471-2164-6-24
retrieved
7 January 2021
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Identifiers
DOI
10.1186/1471-2164-6-24
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Dimensions Publication ID
1033488732
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PMC publication ID
555765
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PubMed publication ID
15723697
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ResearchGate publication ID
8009316
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