(Q24810651)

English

A generic approach for the design of whole-genome oligoarrays, validated for genomotyping, deletion mapping and gene expression analysis on Staphylococcus aureus

scientific article

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

4 July 2017

A generic approach for the design of whole-genome oligoarrays, validated for genomotyping, deletion mapping and gene expression analysis on Staphylococcus aureus (English)

1 reference

Europe PubMed Central

4 July 2017

Staphylococcus aureus

1 reference

based on heuristic

inferred from title

whole genome sequencing

1 reference

based on heuristic

inferred from title

Patrice François

3

object named as

Patrice François

1 reference

Europe PubMed Central

4 July 2017

6

object named as

Pierre Vaudaux

1 reference

Europe PubMed Central

4 July 2017

Jacques Schrenzel

8

object named as

Jacques Schrenzel

1 reference

Europe PubMed Central

4 July 2017

4

object named as

Manuela Bento

1 reference

Europe PubMed Central

4 July 2017

Yvan Charbonnier

1

object named as

Yvan Charbonnier

1 reference

Europe PubMed Central

4 July 2017

Adriana Renzoni

5

object named as

Adriana Renzoni

1 reference

Europe PubMed Central

4 July 2017

2

object named as

Brian Gettler

1 reference

Europe PubMed Central

4 July 2017

author name string

Werner Schlegel

7

1 reference

Europe PubMed Central

4 July 2017

language of work or name

0 references

publication date

17 June 2005

1 reference

Europe PubMed Central

4 July 2017

1 reference

Europe PubMed Central

4 July 2017

6

1 reference

Europe PubMed Central

4 July 2017

95

1 reference

Europe PubMed Central

4 July 2017

1

0 references

copyright license

Creative Commons Attribution 2.0 Generic

17 June 2005

1 reference

April 2022 Public Data File from Crossref

copyright status

1 reference

April 2022 Public Data File from Crossref

https://scigraph.springernature.com/pub.10.1186/1471-2164-6-95

0 references

Insights on Evolution of Virulence and Resistance from the Complete Genome Analysis of an Early Methicillin-Resistant Staphylococcus aureus Strain and a Biofilm-Producing Methicillin-Resistant Staphylococcus epidermidis Strain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

A novel design of whole-genome microarray probes for Saccharomyces cerevisiae which minimizes cross-hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Improved analytical methods for microarray-based genome-composition analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Within the fold: assessing differential expression measures and reproducibility in microarray assays.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Gene expression analysis using oligonucleotide arrays produced by maskless photolithography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Microarray results: how accurate are they?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Basic local alignment search tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

The complete genome sequence of Escherichia coli K-12

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Genome and virulence determinants of high virulence community-acquired MRSA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Whole genome sequencing of meticillin-resistant Staphylococcus aureus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Microarray data normalization and transformation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

7 April 2017

Genome-scale design of PCR primers and long oligomers for DNA microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Hybridization properties of support-bound oligonucleotides: the effect of the site of immobilization on the stability and selectivity of duplex formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

OligoDesign: optimal design of LNA (locked nucleic acid) oligonucleotide capture probes for gene expression profiling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Spotted long oligonucleotide arrays for human gene expression analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Microarray-based detection and genotyping of viral pathogens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

mRNA expression profiles for Escherichia coli ingested by normal and phagocyte oxidase-deficient human neutrophils

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Genomic DNA standards for gene expression profiling in Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Differential gene expression patterns revealed by oligonucleotide versus long cDNA arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Increased expression of clumping factor and fibronectin-binding proteins by hemB mutants of Staphylococcus aureus expressing small colony variant phenotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

An assessment of Motorola CodeLink microarray performance for gene expression profiling applications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Transcription profiling-based identification of Staphylococcus aureus genes regulated by the agr and/or sarA loci.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Prokaryotic RNA preparation methods useful for high density array analysis: comparison of two approaches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Pathogenicity and resistance islands of staphylococci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Microarrays for microbiologists

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

The intercellular adhesion (ica) locus is present in Staphylococcus aureus and is required for biofilm formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Polymorphism analysis and gene detection by minisequencing on an array of gel-immobilized primers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

DNA analysis and diagnostics on oligonucleotide microchips

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 September 2017

Unravelling the biology of macrophage infection by gene expression profiling of intracellular Salmonella enterica

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

30 May 2018

An open-source oligomicroarray standard for human and mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183204

28 November 2018

Microarray fabrication with covalent attachment of DNA using bubble jet technology

1 reference

https://pubmed.ncbi.nlm.nih.gov/15963225

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

OligoArray: genome-scale oligonucleotide design for microarrays

1 reference

https://pubmed.ncbi.nlm.nih.gov/15963225

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cheap DNA arrays-it's not all smoke and mirrors

1 reference

https://pubmed.ncbi.nlm.nih.gov/15963225

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-6-95

1 reference

Europe PubMed Central

4 July 2017

Dimensions Publication ID

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-6-95

9 September 2019

1 reference

Europe PubMed Central

4 July 2017

1 reference

Europe PubMed Central

4 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q24810651&oldid=2139061005"