(Q24811161)

4 July 2017

title

The Gumbel pre-factor k for gapped local alignment can be estimated from simulations of global alignment (English)

1 reference

4 July 2017

3

John L Spouge

1 reference

4 July 2017

Sergey Sheetlin

1

1 reference

4 July 2017

Yonil Park

series ordinal

2

1 reference

4 July 2017

language of work or name

English

0 references

publication date

6 September 2005

1 reference

4 July 2017

published in

Nucleic Acids Research

1 reference

4 July 2017

volume

33

1 reference

4 July 2017

issue

15

1 reference

4 July 2017

page(s)

4987-4994

1 reference

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

4 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Amino acid substitution matrices from protein blocks

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Basic local alignment search tool

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Identification of common molecular subsequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

A general method applicable to the search for similarities in the amino acid sequence of two proteins

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

The estimation of statistical parameters for local alignment score distributions.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Local alignment statistics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Rapid and accurate estimates of statistical significance for sequence data base searches

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

The statistical distribution of nucleic acid similarities

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Distribution of glutamine and asparagine residues and their near neighbors in peptides and proteins

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Rapid assessment of extremal statistics for gapped local alignment

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

The significance of protein sequence similarities.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Maximum-likelihood estimation of the statistical distribution of Smith-Waterman local sequence similarity scores

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Rapid significance estimation in local sequence alignment with gaps.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Statistical significance of probabilistic sequence alignment and related local hidden Markov models.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Local sequence alignments with monotonic gap penalties.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

An improved algorithm for matching biological sequences.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1199557

Accurate formula for P-values of gapped local sequence and profile alignments

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16147981

12 December 2020

inferred from PubMed ID database lookup

Approximate P-Values for Local Sequence Alignments: Numerical Studies

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16147981

12 December 2020

inferred from PubMed ID database lookup

Approximate statistics of gapped alignments

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16147981

12 December 2020

inferred from PubMed ID database lookup

Robust Estimation of a Location Parameter

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKI800

7 January 2021

inferred from DOI database lookup

Limit Distribution of Maximal Non-Aligned Two-Sequence Segmental Score

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKI800

7 January 2021

inferred from DOI database lookup

Robust Regression: Asymptotics, Conjectures and Monte Carlo

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKI800

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1093/NAR/GKI800

1 reference

4 July 2017

1 reference

4 July 2017

1 reference