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PARALIGN: rapid and sensitive sequence similarity searches powered by parallel computing technology

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PARALIGN: rapid and sensitive sequence similarity searches powered by parallel computing technology (English)

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5

Torbjørn Rognes

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author name string

Per Eystein Saebø

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1

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Sten Morten Andersen

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2

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Jon Myrseth

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3

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Jon K Laerdahl

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4

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language of work or name

English

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publication date

1 July 2005

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published in

Nucleic Acids Research

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volume

33

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issue

Web Server issue

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page(s)

W535-9

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cites work

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160184

retrieved

7 April 2017

Profile hidden Markov models

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160184

retrieved

7 April 2017

Identification of common molecular subsequences

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160184

retrieved

7 April 2017

Rapid and sensitive sequence comparison with FASTP and FASTA

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160184

retrieved

7 April 2017

ParAlign: a parallel sequence alignment algorithm for rapid and sensitive database searches.

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160184

retrieved

28 September 2017

Searching protein sequence libraries: Comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160184

retrieved

28 September 2017

Six-fold speed-up of Smith-Waterman sequence database searches using parallel processing on common microprocessors

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160184

retrieved

28 November 2018

Identifiers

DOI

10.1093/NAR/GKI423

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4464411

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journals/nar/SaeboAMLR05

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DBLP Dataset 2021-01-02

retrieved

28 January 2021

OpenCitations bibliographic resource ID

4464411

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4464411

PubMed publication ID

15980529

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stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4464411

ResearchGate publication ID

7762399

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(Q24812714)

PARALIGN: rapid and sensitive sequence similarity searches powered by parallel computing technology

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