(Q26261238)

Department of Bioinformatics - BiGCaT

5

affiliation

0 references

Chris T. Evelo

6

object named as

Chris T Evelo

0 references

Martina Summer-Kutmon

2

0 references

7

0 references

4

0 references

Anders Riutta

object named as

Anders Riutta

PLOS Computational Biology

3

0 references

language of work or name

English

0 references

publication date

June 2016

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number of pages

11

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published in

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volume

12

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page(s)

e1004989

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issue

6

0 references

copyright license

Creative Commons Attribution 4.0 International

start time

23 June 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

WikiPathways: capturing the full diversity of pathway knowledge

has goal

uses method in cited work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

The application of the open pharmacological concepts triple store (Open PHACTS) to support drug discovery research

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

HMDB 3.0--The Human Metabolome Database in 2013

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Identifiers.org and MIRIAM Registry: community resources to provide persistent identification

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Entrez Gene: gene-centered information at NCBI

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Pathway Commons, a web resource for biological pathway data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Presenting and exploring biological pathways with PathVisio

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Automatically visualise and analyse data on pathways using PathVisioRPC from any programming environment

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

The ChEMBL bioactivity database: an update

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Open PHACTS: semantic interoperability for drug discovery

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

PubChem Substance and Compound databases

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

WikiPathways: building research communities on biological pathways

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

BioModels: Content, Features, Functionality, and Use

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

UniProt: a hub for protein information

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Ten years of pathway analysis: current approaches and outstanding challenges

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

The Systems Biology Graphical Notation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

PathVisio-MIM: PathVisio plugin for creating and editing Molecular Interaction Maps (MIMs)

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Finding the right questions: exploratory pathway analysis to enhance biological discovery in large datasets

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Biotransformation pathway maps in WikiPathways enable direct visualization of drug metabolism related expression changes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Molecular interaction maps of bioregulatory networks: a general rubric for systems biology

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

PAX of mind for pathway researchers

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

Systems biology markup language: Level 2 and beyond

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4918977

WikiPathways Project: At the Intersection of Big Data and Researcher Knowledge

28 September 2017

0 references

ChemSpider: An Online Chemical Information Resource

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1004989

When owl:sameAs Isn’t the Same: An Analysis of Identity in Linked Data

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1004989

Jena: a semantic Web toolkit

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1004989

inferred from DOI database lookup

7 January 2021

based on heuristic

Erratum: The Systems Biology Graphical Notation

1 reference

COCI

https://opencitations.net/index/api/v1/references/10.1371/JOURNAL.PCBI.1004989

10.1371/JOURNAL.PCBI.1004989

13 January 2024

Identifiers

DOI

1 reference

journals/ploscb/WaagmeesterKRMW16

557464

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

557464

1 reference

1 reference

1 reference