(Q26766083)

19 September 2019

12 September 2020

13 September 2020

10 November 2020

describes a project that uses

8 April 2021

copyright status

copyrighted

0 references

Cytoscape

object named as

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/s13742-016-0117-6

0 references

cites work

Rescuing US biomedical research from its systemic flaws

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Dissemination of metabolomics results: role of MetaboLights and COSMOS

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Neuroimaging study designs, computational analyses and data provenance using the LONI pipeline

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Class-imbalanced classifiers for high-dimensional data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Minimum information requested in the annotation of biochemical models (MIRIAM)

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Voxel-based morphometry–the methods

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

SOCR data dashboard: an integrated big data archive mashing medicare, labor, census and econometric information

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Globus Platform-as-a-Service for Collaborative Science Applications

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Challenges of Big Data Analysis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Processing shotgun proteomics data on the Amazon cloud with the trans-proteomic pipeline

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

A sea of standards for omics data: sink or swim?

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

mzML--a community standard for mass spectrometry data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Network medicine: a network-based approach to human disease

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

The Unified Medical Language System (UMLS): integrating biomedical terminology

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

A review of ensemble methods for de novo motif discovery in ChIP-Seq data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

What Difference Does Quantity Make? On the Epistemology of Big Data in Biology

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Gene interactions and structural brain change in early-onset Alzheimer's disease subjects using the pipeline environment

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Using CellML with OpenCMISS to Simulate Multi-Scale Physiology

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Cytoscape tools for the web age: D3.js and Cytoscape.js exporters

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Deep learning in neural networks: an overview

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

A tribal abstraction network for SNOMED CT target hierarchies without attribute relationships.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

A survey of prostate modeling for image analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Data Integration Protocol In Ten-steps (DIPIT): a new standard for medical researchers

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

High-throughput neuroimaging-genetics computational infrastructure

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Mining the electronic health record for disease knowledge

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Automated segmentation and shape characterization of volumetric data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

tranSMART: An Open Source and Community-Driven Informatics and Data Sharing Platform for Clinical and Translational Research

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

SBML and CellML translation in antimony and JSim.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Sequence analysis by iterated maps, a review

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Big data: the management revolution

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Multivariate statistical analyses for neuroimaging data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Genome-wide enhancer prediction from epigenetic signatures using genetic algorithm-optimized support vector machines.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Analyzing biological data using R: methods for graphs and networks

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

SOCR Motion Charts: An Efficient, Open-Source, Interactive and Dynamic Applet for Visualizing Longitudinal Multivariate Data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Large-scale directional connections among multi resting-state neural networks in human brain: a functional MRI and Bayesian network modeling study

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Hybrid genetic and variational expectation-maximization algorithm for gaussian-mixture-model-based brain MR image segmentation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Biomarkers in Parkinson's disease: a funder's perspective

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

A guided tour of the Trans-Proteomic Pipeline

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Comparing 3 T and 1.5 T MRI for tracking Alzheimer's disease progression with tensor-based morphometry

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Data standards in clinical research: gaps, overlaps, challenges and future directions

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Standards for reporting bioscience data: a forward look

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Direct cortical mapping via solving partial differential equations on implicit surfaces

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Hessian eigenmaps: locally linear embedding techniques for high-dimensional data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Nonlinear dimensionality reduction by locally linear embedding

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

A picture is worth a thousand words: practical use of videotape in teaching

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Direct likelihood inference and sensitivity analysis for competing risks regression with missing causes of failure.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Big data for Natural Language Processing: A streaming approach

28 September 2017

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Sharing big biomedical data

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Inhomogeneity correction using an estimated linear field map.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Volumetric feature extraction and visualization of tomographic molecular imaging

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

21 January 2018

Voxel-Based Morphometry

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Maximizing the spread of influence through a social network

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

The Analysis of Duocentric Social Networks: A Primer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Growing scale-free networks with tunable clustering.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

An Experimental Study of the Small World Problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Geometrically local embedding in manifolds for dimension reduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Scalable algorithms for association mining

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Accounting for data heterogeneity in patterns of biodiversity: an application of linear mixed effect models to the oceanic island biogeography of spore-producing plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Scalable SQL and NoSQL data stores

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Google’s MapReduce programming model — Revisited

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

The management and mining of multiple predictive models using the predictive modeling markup language

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

The LONI Debabeler: a mediator for neuroimaging software.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Data-intensive applications, challenges, techniques and technologies: A survey on Big Data

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

Big data: survey, technologies, opportunities, and challenges.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

TumorML: Concept and requirements of an in silico cancer modelling markup language.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4766610

Trend mining in social networks: from trend identification to visualization

28 November 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

ManyEyes: a site for visualization at internet scale

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26918190

12 December 2020

inferred from PubMed ID database lookup

Automated Sulci Identification via Intrinsic Modeling of Cortical Anatomy

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26918190

12 December 2020

inferred from PubMed ID database lookup

Discovering Knowledge in Data

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

Independent component analysis, A new concept?

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

An assessment of the effectiveness of a random forest classifier for land-cover classification

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

Support vector machine and optimised feature extraction in integrated eddy current instrument

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

Data clustering: 50 years beyond K-means

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

Theoretical challenges in understanding galaxy evolution

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

Automated unsupervised classification of the Sloan digital sky survey stellar spectra using k-means clustering

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

An Introduction To Compressive Sampling

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

MapReduce: Simplified Data Processing on Large Clusters

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

The WEKA data mining software: an update

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

Supervised random walks

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0117-6

7 January 2021

10.1186/S13742-016-0117-6

Identifiers

DOI

1 reference

Dimensions Publication ID

2385302

1047341774

0 references

Fatcat ID

release_baulwct3ijbehnlysytduus4kq

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/baulwct3ijbehnlysytduus4kq

24 November 2022

mapped directly with Wikidata item

2385302

1 reference

1 reference

1 reference