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Epigenetic regulation of stem cells differentiating along the neural lineage
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scholarly article
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PubMed
title
Epigenetic regulation of stem cells differentiating along the neural lineage
(English)
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stated in
PubMed
author name string
Volkan Coskun
series ordinal
1
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Crossref
Rosemarie Tsoa
series ordinal
2
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Crossref
Yi E Sun
series ordinal
3
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Crossref
language of work or name
English
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stated in
PubMed
publication date
October 2012
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stated in
PubMed
published in
Current Opinion in Neurobiology
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stated in
PubMed
volume
22
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PubMed
issue
5
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PubMed
page(s)
762-7
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PubMed
cites work
Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Nucleosome-interacting proteins regulated by DNA and histone methylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Sensitive enzymatic quantification of 5-hydroxymethylcytosine in genomic DNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Human DNA methylomes at base resolution show widespread epigenomic differences
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Prediction of novel families of enzymes involved in oxidative and other complex modifications of bases in nucleic acids
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Genome-scale DNA methylation maps of pluripotent and differentiated cells
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
UHRF1 plays a role in maintaining DNA methylation in mammalian cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Dnmt3L cooperates with the Dnmt3 family of de novo DNA methyltransferases to establish maternal imprints in mice
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Targeted mutation of the DNA methyltransferase gene results in embryonic lethality
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Epigenetic reprogramming in mammalian development
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
CpG islands and the regulation of transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Comprehensive methylome map of lineage commitment from haematopoietic progenitors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Control of developmental regulators by Polycomb in human embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Tet1 and Tet2 regulate 5-hydroxymethylcytosine production and cell lineage specification in mouse embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Polycomb complexes repress developmental regulators in murine embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
DNA methylation landscapes: provocative insights from epigenomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Chromatin signatures of pluripotent cell lines
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
7 April 2017
Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
Dnmt3a is essential for hematopoietic stem cell differentiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
Dual functions of Tet1 in transcriptional regulation in mouse embryonic stem cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
Epigenetic reprogramming in plant and animal development
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
Selective anchoring of DNA methyltransferases 3A and 3B to nucleosomes containing methylated DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
Oxygenase catalyzed 5-methylcytosine hydroxylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
REST maintains self-renewal and pluripotency of embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
Polycomb group proteins Ring1A/B are functionally linked to the core transcriptional regulatory circuitry to maintain ES cell identity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
The Dnmt1 DNA-(cytosine-C5)-methyltransferase methylates DNA processively with high preference for hemimethylated target sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
Active demethylation of the paternal genome in the mouse zygote
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 September 2017
Dnmt3a-dependent nonpromoter DNA methylation facilitates transcription of neurogenic genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
31 May 2018
DNA-binding factors shape the mouse methylome at distal regulatory regions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 November 2018
Identification of genetic elements that autonomously determine DNA methylation states.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 November 2018
REST selectively represses a subset of RE1-containing neuronal genes in mouse embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 November 2018
REST and its corepressors mediate plasticity of neuronal gene chromatin throughout neurogenesis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489177
retrieved
28 November 2018
Dnmt3a silences hematopoietic stem cell self-renewal
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22835699
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Mitochondria and the death of oocytes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22835699
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Demethylation of the zygotic paternal genome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.CONB.2012.07.001
retrieved
7 January 2021
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inferred from DOI database lookup
Identifiers
DOI
10.1016/J.CONB.2012.07.001
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Fatcat ID
release_o5inexbmvfhrlfifiph6peadja
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PMCID
3489177
1 reference
stated in
PubMed
PubMed ID
22835699
1 reference
stated in
PubMed
ResearchGate publication ID
230572427
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